Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0255
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCTCGCCCAGCACAGCAATGGTGTGCTAAGTCGCTTGCGCCCGACCAAGATCGAGGATCATCCGCTGCCGGGTCCGGCCGGGCGCGGGGCAATTCTTG TCCGCTTCGGCGAAGGCGAAGATGCGCTTGTGGTGGTCATGATGCACCTGGCTCTGGGCACTCGTACCAGAACCCGGCAACTGGCTTACATTCGCGACCT GATCGGCGGTTATCGCCATCAGGTGCTGATGGGCGACATGAATACCCACGCCAATGACCTGCTGGAGCACTCGCCGCTACGCGATCTGGGCCTTTTGGCA CCGCAAATCGAAGCGACCTTTCCAAGCTGGCGACCACAACGCTGCCTTGACCACATTCTGCTCAGCCCGACCCTCACACTTGAACGCGTACAGGTACTGG CGCAGCCCATTTCCGATCACCTGCCGGTTGCTGTCGAGATTCGCCTGCCAGACTCACTGCGTGGGGACTCACTGCCTGTGCCCTCTGGTGGAAGCCTTGC
|
|
| DNA Sequence for Gene |
>PSPPH_0255
ATGAGCGACGACGCGGAGCGTTGGAAAGAGAAGTACCTCAAGGGAATCGAGCAACAGGATAAGCTCGAAAAGCGCTGGGATGCGCGGCTCGACTTGCTGC GCCGCGGTCTGGTGCGCAGCAGCCTGGCAGCAGAAGGCTCTGACCGCGCCGTCGATGAATGCATGAAGGAAATGCGCGAAATTGTCCGCAAGGACGATAT GGACGCCGGTCTGGCAGCCTTGATTCCGCGCCTCGAAAAAGCCGTACTGGACTCCGAGCATCGCCGTGAAGTACGGGTCGGGCAAATTGGCTCGGCACTG ACCGCACTGGTTGCACAACTGCAAGCGCTACCGTTGCCACGAGAGGTACGCAAGCCACTCAAGCGCTTTGCCAAGGACCTTGAAGAACGTGCATCGCAGG CGCGCGAGCTGCCTTTGCTGCTCAGCGAGTTGAGTGGTTTGCAGGGCCAGGCCCTGACCCTGCTCGAAAAGCACGAAGAGGGCCCACGCCAAGGGCTTCT GCAGCGTTTGTTCGGTTCGCGGGACGAACATGGCAATGAGCGCCCTCCCGAGGCTGCCCACCCCGAAAACGCCCCTTCTGCTCAGGAAACGCATGAGACG CACGTGCAACCTGAGGCCGCGAACGCTCAAGCGCCGATAGACGTTGCCGCAGCGGAAGTAGAAGCTGCCATTGCCCCCGACATCGTCAACCAGAAGACAA AGGACGCACACACACTGCCGCCACAGGTTTCAGAAGCCGAAACCGCTATCGTTACGGCACCTGAAACACCTGTGCCATCGCCAGCCGCAGCAGCCCTTGC TCCAGCCCTGGCCGAAACAGTCACCGAACCTGCGGTTGTCCCTGTCGAGCCTATCGATTTCACTGACCTGCTGGGCCCCGTTCCTTCAGTGCCCTACCAG CAACGGCCTGCTCCAATCATCCAGGCACTGGAACAGCCGCAAGAGGATGCCGAATCAGAAACCGAAACGGTGGAAGGCGAAGAGGGTTATTCGCTGCCCT CCTCGCCAGAACCCAGCTACAGCTCGGTGGCGGCACACATTGAGGAAACCCTGCTGGGCCTGCTCGATGACCTGACCTTGTCGGAGCACTTCCGCCCGCA GGTCGAGGACATGCAGTTACGCTTGAAACATGGGCTCAACTGGTACGAACTGCTACCGATCCTCGACGATCTGGCAGTTCTGATGCTGGCAATCAACAAC GGCGGCCAACAGGAATTCAGCACCTACCTCAAACAACTCAATGAGCGGCTCGAATCGTTTCAGAGCCATTTGCAGGCTGCCAGTGAAGATCATGCCGAGG ATCAGTCCACAGCCCGCGACCTGAACGAGCAGTTGCGCGAACAGGTGGGCGGCCTGCAGATCAGCGTTCAGGACGCTTCCGACCTGACCAGTCTCAAGCA GGTGCTCGACAACCGCTTTGAAGGCTTGCTCAGCACCATGGACCACTACCAGCTCAAGCGTGACGCACGCGAGCGGGAAGTTGCCTCGCGGCTGCAAGGC CTTTCGGCCCGCGTTGCGAGCATGGAGCAGGAAGCGCTGGGTTTCAGGACTCACCTGGAAGAACAGCGCCAAAAGGCCTTGATCGACCCGCTCACCGGCC TGCCCAATCGCGCAGCCTGGGGCGAGCGCCTCGAACAGGAGATGAGCAAGTGGCAACACGAGAAAAACAGCCTGCTGGTGTGCATTCTGGACTTGGACCA CTTCAAGCGCATCAATGACGGATATGGCCACCTGGCAGGCGATAAAGTGCTGAAGATCGTCGCCAACGTTTTCAGGAAACGCCTGCGCAGCGACGATTTT CTCGCCCGGTTTGGCGGTGAGGAATTTGTCATGCTGTTGCCTGCTACGCCTCCCGGCACCGGGCTGACGTTGCTCGACGAACTTCGAGCTGCGGTGGAGT CATGCCCGTTTCACTTCAAGGGCGAGCGCGTGACGATCACCGTATCTATTGGAGTGACGGCTTTTCGAACGGCTGAACGCAGTGACACTGCGATCAAGCG CGCCGATCAGGCGCTGTACAGGGCCAAGGAAAATGGCCGAAACAGGGTCGAACAAGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CTGAAATATTTTGACCTGAACGAGCACGTCAATGCCGAAGCTATTTGTACGCATGTTGTTATGATATTGCATTTCCCGCTGACGCTGCCGATCCCATGAA ACTGTATTTCTCTGCCTTTCTGCTGCTCATCCTCACTGCCTGCGCCAGTGGCCCCAGGCTGGACACCAGCCATCCATCGGTGAATTTCGATGGCCGGGTT CAGTACGTGATCATGCATTACACCTCCACCTCGATGGAGAAATCCCTCCAGCTTCTGACCCATGGCGAGGTCAGCAGCCACTATCTGATTGGCGATGACA GCAAGGCCACTATCTACAAGCTGGTCGATGAAAGCGCCCGCGCCTGGCATGCTGGCGAAAGCGAATGGGAAGGCCGTACCTGGCTTAATTCCAGCTCGAT CGGCATCGAGATCGTCAACCCCGGCTTCAAGGACACACCGGCAGGCCGGTTGTGGTACCCCTACACCGAAGCACAGATCCAGTCGATCACAGTACTGCTC
|
|
| Amino Acid Sequence |
>diguanylate cyclase
MSDDAERWKEKYLKGIEQQDKLEKRWDARLDLLRRGLVRSSLAAEGSDRAVDECMKEMREIVRKDDMDAGLAALIPRLEKAVLDSEHRREVRVGQIGSAL TALVAQLQALPLPREVRKPLKRFAKDLEERASQARELPLLLSELSGLQGQALTLLEKHEEGPRQGLLQRLFGSRDEHGNERPPEAAHPENAPSAQETHET HVQPEAANAQAPIDVAAAEVEAAIAPDIVNQKTKDAHTLPPQVSEAETAIVTAPETPVPSPAAAALAPALAETVTEPAVVPVEPIDFTDLLGPVPSVPYQ QRPAPIIQALEQPQEDAESETETVEGEEGYSLPSSPEPSYSSVAAHIEETLLGLLDDLTLSEHFRPQVEDMQLRLKHGLNWYELLPILDDLAVLMLAINN GGQQEFSTYLKQLNERLESFQSHLQAASEDHAEDQSTARDLNEQLREQVGGLQISVQDASDLTSLKQVLDNRFEGLLSTMDHYQLKRDAREREVASRLQG LSARVASMEQEALGFRTHLEEQRQKALIDPLTGLPNRAAWGERLEQEMSKWQHEKNSLLVCILDLDHFKRINDGYGHLAGDKVLKIVANVFRKRLRSDDF LARFGGEEFVMLLPATPPGTGLTLLDELRAAVESCPFHFKGERVTITVSIGVTAFRTAERSDTAIKRADQALYRAKENGRNRVEQG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|