Pseudomonas syringae pv. tomato DC3000, PSPTO_5248

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0003333 amino acid transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF039085
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015424 ATPase-coupled amino acid transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF039085
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00005
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.40.50.300:FF:000020 Amino acid ABC transporter ATP-binding component - - 2 242 1.5E-102
PIRSF PIRSF039085 ABC_ATPase_HisP IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type 1 243 4.1E-107
PANTHER PTHR43166 AMINO ACID IMPORT ATP-BINDING PROTEIN - - 3 238 7.6E-85
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 3 236 7.61E-77
CDD cd03262 ABC_HisP_GlnQ - - 4 216 1.61052E-127
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 1 241 2.0E-77
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 28 215 7.2E-20
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 19 167 4.0E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.