Pseudomonas syringae pv. tomato DC3000, PSPTO_4851

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00263
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 211 235 4.4E-12
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 364 378 4.4E-12
Pfam PF00263 Bacterial type II and III secretion system protein IPR004846 Type II/III secretion system 215 377 7.7E-41
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 248 258 4.4E-12
PANTHER PTHR30332 PROBABLE GENERAL SECRETION PATHWAY PROTEIN D - - 102 377 8.2E-45
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 341 359 4.4E-12
Pfam PF13629 Pilus formation protein N terminal region IPR032789 Pilus formation protein, N-terminal 42 109 3.7E-17

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.