Pseudomonas syringae pv. tomato DC3000, PSPTO_4171 (aatJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0070778 L-aspartate transmembrane transport
ISO
Inferred from Sequence Orthology
Term mapped from: PseudoCAP:PP_1071
 ECO:0000201
sequence orthology evidence		 18310026 Reviewed by curator
Biological Process GO:0051938 L-glutamate import
ISO
Inferred from Sequence Orthology 		ECO:0000201
sequence orthology evidence		 18310026 Reviewed by curator
Biological Process GO:0006868 glutamine transport
ISO
Inferred from Sequence Orthology
Term mapped from: PseudoCAP:PP_1071
 ECO:0000201
sequence orthology evidence		 18310026 Reviewed by curator
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 17021207 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pst02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.190.10 - - - 133 228 1.3E-101
SMART SM00062 AABind_6 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 38 271 2.6E-53
FunFam G3DSA:3.40.190.10:FF:000052 Amino acid ABC transporter substrate-binding protein - - 133 228 2.7E-44
CDD cd13688 PBP2_GltI_DEBP - - 30 268 7.35128E-110
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 39 268 2.2E-48
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 10 271 5.91E-62
PANTHER PTHR30085 AMINO ACID ABC TRANSPORTER PERMEASE - - 10 297 3.2E-80
Gene3D G3DSA:3.40.190.10 - - - 29 273 1.3E-101

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.