Pseudomonas syringae pv. tomato DC3000, PSPTO_4171 (aatJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CGATCAGGAATGGGCCACGGACATCAAAGACATCCTCTGGCGCCGCACCAAGCTTGGCCTGTTTACCACGCCTGAAGAACAGGCTGCGGTCAGCAGCTAT ATGGACACCGTCGCACGCAACAAGGCCACTATCGAAGCGGCCTGATGCTCACGCTATTTACCTGTTCACCCCTCACCGGGTGAACAGGTCTGCGCTTCAA TCCCCCCGCACTTCCCTCTCCTGAATATTCGACTGCATTCGGCTTTCCGAACGCGTCTCCCTGCGCGATTCGGTTTCCCGGACGCACCCGCACACCACAC ACACATTTAATCCCGATAAAAACCATAAAATTCAACACGTTAAAGCCTAAATAACGTTTGGCACGACTCATGCCCTACATTCAGGAACCGACCGCTTCGG CAAAGGCGTGTGTCTATCAGGACGCCGTTGAAGCATTCGTAAGAAAGCGGCCGCCTCTCATTGCGGCTCTATCAATAAAAATGAAATCGAGGATTCATCG
DNA Sequence for Gene
>PSPTO_4171 |aatJ
ATGCGTATCGTTCCCCATCTGCTTGGCGCAGCCATTGCTGCCGCTCTGATCAGCACTCCGGTTTTCGCCGCCGAACTCACCGGCACCCTGAAGAAGATCA AAGAATCCGGCACTATCACCCTCGGCCACCGTGACGCCTCCATCCCGTTTTCCTACATCGCGGATGCCTCTGGCATACCGATGGGCTACTCCCATGACAT CCAGCTGAAAATCGTCGAAGCCATCAAGAAAGAACTCGACATGCCTGACCTCAAGGTCAAGTACAACCTGGTGACGTCCCAGACTCGAATCCCGCTGGTG CAGAACGGCACTGTTGACGTGGAATGTGGTTCGACCACCAACAACGTCGAGCGTCAGCAGCAGGTCGATTTCTCCATCGGCATCTTCGAAGTCGGTACAC GCCTGCTGTCCAAGAAAGACTCCAGCTACAAGGACTTCGATGACCTGAAAGGCAAGAACGTCGTGACCACGGCCGGCACCACGTCCGAGCGAATCATCAA GACGATGAACGCCGACAAGCAGATGGGCATGAACGTGATCTCCGCCAAGGACCACGGTGAGTCGTTCCAGATGCTTGAATCCGGCCGTGCAGTCGCTTTC ATGATGGACGACGCATTGCTGGCCGGCGAGATGGCCAAAGCCAAGAAGCCGGATGACTGGGCTGTGACCGGCACTGCGCAATCCTACGAAATCTATGGCT GCATGGTTCGCAAGGGCGACGCCCCGTTCAAGAAGGCCGTGGATGACGCCATTGTCGCCACCTACAAGTCCGGCGACATCAATGCCATCTACAGCAAGTG GTTCATGTCGCCAGTCCCGCCTAAAGGGCTGAATCTGAATTTCCCGATGAGCGCCGAACTCAAGAAGCTGATCGAGAACCCCACCGACAAAGCTGCTGAC GACAAAGCTGAAGACAAGAAAGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTAAGCGGTTCAACCACCCTGAACTGATTACATCCCGAACGAGCCCGCCTCGTTCGGGATCGGCCCATCGCTTTCGATTTTCGACAGTGCGTGCATTTCG ATAGAAATAGAACAATAGGGGGAGACCCTGATGAATTACAACTGGGACTGGGGCGTGTTCTTCAAGTCCACCGGCGTCGGCAGCGAGACCTATCTGGACT GGTTCATATCCGGTCTCGGCTGGACCATTGCCATTGCTGTCGTTGCCTGGATCATAGCGCTGATACTGGGCTCGGTACTGGGCGTCATGCGCACCGTGCC AAGCCGTCTGGTATCAGGTATTGCCACGGCCTACGTAGAAATCTTCCGTAACGTGCCACTGCTGGTGCAGCTGTTCATCTGGTACTTTCTGGTGCCTGAT CTGCTGCCTGCAGACCTGCAGGAGTGGTACAAGCAGGACCTCAACCCGACCACCTCGGCGTTTCTGAGCGTTGTCGTGTGTCTGGGTCTGTTCACTGCTG
Amino Acid Sequence
>amino acid ABC transporter substrate-binding protein
MRIVPHLLGAAIAAALISTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGIPMGYSHDIQLKIVEAIKKELDMPDLKVKYNLVTSQTRIPLV QNGTVDVECGSTTNNVERQQQVDFSIGIFEVGTRLLSKKDSSYKDFDDLKGKNVVTTAGTTSERIIKTMNADKQMGMNVISAKDHGESFQMLESGRAVAF MMDDALLAGEMAKAKKPDDWAVTGTAQSYEIYGCMVRKGDAPFKKAVDDAIVATYKSGDINAIYSKWFMSPVPPKGLNLNFPMSAELKKLIENPTDKAAD DKAEDKKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site