Pseudomonas syringae pv. tomato DC3000, PSPTO_2484

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2484
NCBI Old Locus Tag	PSPTO2484
Name	Synonym: PSPTO2484
Replicon	chromosome
Genomic location	2743976 - 2746378 (+ strand)

Cross-References

RefSeq	NP_792296.1
GI	28869677
Entrez	1184136
INSDC	AAO55991.1
NCBI Locus Tag	PSPTO_2484
NCBI Old Locus Tag	PSPTO2484
UniParc	UPI0000008BD1
UniProtKB Acc	Q882Y8
UniProtKB ID	Q882Y8_PSESM
UniRef100	UniRef100_Q882Y8
UniRef50	UniRef50_Q882Y8
UniRef90	UniRef90_Q882Y8

Product

Feature Type	CDS
Coding Frame	1
Product Name	TonB-dependent siderophore receptor
Synonyms
Evidence for Translation
Charge (pH 7)	-10.34
Kyte-Doolittle Hydrophobicity Value	-0.379
Molecular Weight (kDa)	86.5
Isoelectric Point (pI)	5.41

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 260 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000897 (3061 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2484 Search term: TonB-dependent siderophore receptor

Human Homologs

References