Pseudomonas syringae pv. tomato DC3000, PSPTO_1649

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01414
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00082
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004252 serine-type endopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.50.200
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008236 serine-type peptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00082
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.200 Peptidase S8/S53 domain IPR036852 Peptidase S8/S53 domain superfamily 34 375 1.2E-59
CDD cd04848 Peptidases_S8_Autotransporter_serine_protease_like IPR034061 Autotransporter serine protease peptidase domain 74 347 4.75482E-83
PRINTS PR00723 Subtilisin serine protease family (S8) signature IPR015500 Peptidase S8, subtilisin-related 123 136 2.8E-16
Pfam PF00082 Subtilase family IPR000209 Peptidase S8/S53 domain 75 364 5.1E-42
Gene3D G3DSA:2.40.128.130 - IPR036709 Autotransporter beta-domain superfamily 678 1001 4.7E-72
SUPERFAMILY SSF103515 Autotransporter IPR036709 Autotransporter beta-domain superfamily 686 1001 2.75E-70
Pfam PF03797 Autotransporter beta-domain IPR005546 Autotransporter beta-domain 729 981 3.3E-57
NCBIfam TIGR02601 JCVI: autotransporter-associated beta strand repeat IPR013425 Autotransporter-associated beta strand repeat 460 491 1.2E-11
PANTHER PTHR43806 PEPTIDASE S8 - - 55 361 8.9E-26
PRINTS PR00723 Subtilisin serine protease family (S8) signature IPR015500 Peptidase S8, subtilisin-related 310 326 2.8E-16
SMART SM00869 Autotransporter_2 IPR005546 Autotransporter beta-domain 726 991 5.4E-55
Pfam PF12951 Passenger-associated-transport-repeat IPR013425 Autotransporter-associated beta strand repeat 461 490 2.8E-8
SUPERFAMILY SSF52743 Subtilisin-like IPR036852 Peptidase S8/S53 domain superfamily 56 374 4.45E-58
PRINTS PR00723 Subtilisin serine protease family (S8) signature IPR015500 Peptidase S8, subtilisin-related 75 94 2.8E-16
NCBIfam TIGR01414 JCVI: outer membrane autotransporter barrel domain IPR006315 Outer membrane autotransporter barrel domain 525 1001 9.3E-44

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.