Pseudomonas syringae pv. tomato DC3000, PSPTO_0465

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_0465
NCBI Old Locus TagPSPTO0465
Name
Synonym: PSPTO0465
Replicon chromosome
Genomic location 510737 - 511840 (+ strand)

Cross-References

RefSeq NP_790314.1
GI 28867695
Entrez 1182074
INSDC AAO54009.1
NCBI Locus Tag PSPTO_0465
NCBI Old Locus Tag PSPTO0465
UniParc UPI000000844B
UniProtKB Acc Q88AC7
UniProtKB ID Q88AC7_PSESM
UniRef100 UniRef100_Q88AC7
UniRef50 UniRef50_Q4K4L5
UniRef90 UniRef90_Q4K4L5

Product

Feature Type CDS
Coding Frame 1
Product Name
AraC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 5.92
Kyte-Doolittle Hydrophobicity Value -0.122
Molecular Weight (kDa) 41.0
Isoelectric Point (pI) 8.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 426 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001883 (1422 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0465

Human Homologs

References

No references are associated with this feature.