Pseudomonas syringae pv. tomato DC3000, PSPTO_0465
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCTGCCTGAT-N79-ATCAGGCAGC | 510433 | 510531 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGATGTCATCACA-N72-TGTGATGACATCG | 510648 | 510745 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGATGTCATCACA-N72-TGTGATGACATCG | 510648 | 510745 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGTGCGACGC-N96-GCGTCGCACG | 511895 | 512010 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGTGCGACGC-N3-GCGTCGCACG | 511895 | 511917 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TGCGACGCAG-N46-CTGCGTCGCA | 511897 | 511962 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CTGCGTCGCA-N27-TGCGACGCAG | 511953 | 511999 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |