Pseudomonas mendocina NK-01, MDS_4591
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mendocina NK-01 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGTGCTGGTCGATGCCAACCTCGAACAGCAACTGTGCCGCGGCATCGCTACCCTCAACCGCAAGTCGCTGAGCAACCCGCCAACCGGCAAGGACACCC CCTTCCGCGAACTCACGGGCAGCCTCAGCGTGCGCGACGGCGTCGCTCACAACCCCGACCTCAAGGCCCAGGTTCCCGGCCTGGCGGTCAGCGGCAATGG CGATCTCGACCTGCGTGTACTGGGTCTCGACTACAAGGTCGGTATCACCATCGAAGGCGACAAGCGTGAAATGCCGGACCCGGCCTGCCAGGTCAACGAA CGTTACGTCGGCATCGAATGGCCGCTGCGCTGCCGCGGCCCACTCGAATTGGGCGCCAAGGCCTGCCGCCTGGATCAGGACGGCCTGGGCAAGATCGCTG CACGTCTGGCCGGCAACAAGCTGACCGAGAAGCTGGAAGAGAAACTCGGCGACAAGGTCAGCCCGGATCTGAAAGACGCACTCAAGGGCCTGTTCAACCG
|
|
| DNA Sequence for Gene |
>MDS_4591
ATGAGTCCCGAGCAGTTCAACGGCGCCGTGCTGGCTTGGTACGACCAGCACGGGCGCAAGGATCTGCCCTGGCAGCAGAACATCACGCCGTATCGCGTGT GGGTTTCGGAAATCATGCTGCAGCAGACCCAGGTCAGCACCGTGCTCGGCTACTTCGACCGTTTCATGGCCGCGCTGCCGACCGTGAAAGACCTGGCCGA AGCCCCCGAAGACGAAGTGCTGCACCTGTGGACGGGCCTGGGCTACTACACCCGCGCACGCAACCTGCAGAAGACCGCGCAGATCATCATCCGCGAGCAC GGCGGCGAGTTCCCGCGCAGCGTTGAGGCGCTGGCCGAGCTGCCCGGTATCGGCCGCTCCACCGCCGGCGCCATCGCCAGTCTTAGCATGGGCGTGCGTG CGCCGATCCTCGACGGCAACGTCAAGCGCGTGCTGGCGCGCTACGTCGCGCAGGAGGGATATCCGGGCGAGCCGAAAGTGGCCAAGCAGCTGTGGGACGT GGCCGAGCGCCTCACCCCCCACGAGCGCGTCAACCACTACACCCAGGCGATGATGGACCTCGGCGCCACCCTGTGCACGCGCAGCAAACCCACCTGCCTA CTGTGTCCGGTGCGCAGCGGCTGCCAGGCACATCTGCTAGGTCTGGAAATCCGCTATCCCATACCGAAGCCACGCAAGACGCTGCCGCAGAAACGCACCC TGATGCCGATTCTGGTCAACGATTCCGGTGACATCCTGCTCTATCGCCGCCCGGCCACTGGCCTGTGGGGAGGGCTGTGGAGCCTGCCGGAGCTGGACGA TCTGGCCCAACTCGACGACCTCGCCCAGCAGCAACAACTGCGCCTCGGCGAGCGCCGCGAACTGGAAGGCCTGATCCACACCTTCAGCCACTTCCAGTTG GCCATCGAACCTTGGCTGATCGAGGCCACCGAGCAGCCGGGCCGCATGGCCGAGGCCGACTGGCTCTGGTATAACCTCGCCACCCCGCCGCGCCTGGGCC TCGCCGCCCCGGTGAAGAAGCTGCTGAAACACGCGGCGCAAGCCATTACCGCTGGAGAACCGACATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CTCGCACCGTACAGTGCCGCAAATACAAACAGGAACTGCCCGGCCTGGATCGCGCGCCCTACCCCGGCCCCAAGGGTGAAGACATCTTCGCCAACGTTTC CAAGCAGGCCTGGGACGAATGGCAGAAGCACCAGACCATGCTGATCAACGAACGCCGCCTGAACATGATGAACGCCGAAGATCGCAAGTTCCTCCAGGCC GAGATGGACAAGTTCCTCTCCGGCGAGGAATACGCCCAGGCCGAAGGCTACGTCCCGCCAAGCGAATAAGCATGCCTGTGGGAGTGGCTTCAGCCGCGAC AACCGCCGCGTATACATCCGCGCAGCCCCGGCTCGCCCTCCCCGCTTTCTCCGCTCACGAACCTAAGCGCCCGAAATAATTAAATATTTTTCAAACCCGC GCTTGACACTGATCCTTCAAATCCGTCTAATAGCGCCCCGTTGGCCCAGGTAGCTCAGTTGGTAGAGCAGGGGATTGAAAATCCCCGTGTCGGCGGTTCG
|
|
| Amino Acid Sequence |
>A/G-specific DNA-adenine glycosylase
MSPEQFNGAVLAWYDQHGRKDLPWQQNITPYRVWVSEIMLQQTQVSTVLGYFDRFMAALPTVKDLAEAPEDEVLHLWTGLGYYTRARNLQKTAQIIIREH GGEFPRSVEALAELPGIGRSTAGAIASLSMGVRAPILDGNVKRVLARYVAQEGYPGEPKVAKQLWDVAERLTPHERVNHYTQAMMDLGATLCTRSKPTCL LCPVRSGCQAHLLGLEIRYPIPKPRKTLPQKRTLMPILVNDSGDILLYRRPATGLWGGLWSLPELDDLAQLDDLAQQQQLRLGERRELEGLIHTFSHFQL AIEPWLIEATEQPGRMAEADWLWYNLATPPRLGLAAPVKKLLKHAAQAITAGEPT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|