Pseudomonas mendocina NK-01, MDS_3831

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas mendocina NK-01 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GTACTGGCCATGGCCAAGCGCCCGGTGCTGGTCTCGCACACCGGCGTCGAAGGCACCTGTGCCGGCACACGCAACCTCAGCGACAAGCACCTGCAGGCCA TTGCCGCCACGGGCGGGGTGATCGGTATCGGCTACTGGAGCACCGCGGTGTGCGACACCTCGGTCGCCGCCATCGTCAAAGCCATCCGCTACGCTGCAGA CAAGGTCGGCGTCGAGCATGTCGCCCTGGGCTCGGACTTCAACGGCACCGTGCACACGCCATTCGATGTCACCGGTTTGGCGCAGATCACCGAAGGCCTG CAAGGCGCCGGCTTCGACGACACGGCCATCGCCGCCATCATGGGTGGCAACGTCCAGCGTCTGCTGCTGGCCAGTCTGCCGGAGAAATGAGGCACTGACC GCACGGTACTCTTGACAGACGCGAGCGAAGCACTTCGCCACGCCCGCGTCTTGCATTACACTGGCGGGCGTTCACTCCTTAACCAGTCGATGAGAAGCCC
DNA Sequence for Gene
>MDS_3831
GTGCTCAAAGCACTCAAGAAAATGTTCGGCAAAGCCGAAGACGAGCAGCCGCAACCAGCGCCGTCACCCGCAACAGCGCCCGCCCGGAACAGTGGCGCCG ACGACAAGCCTCCCCGCAAGAACAAGCCCGCCCGCAACGCTGGCGAGACCACTGGCGAGAGCCCCGCTGCACAACAGCCGCGCCCGCCGAAAGCCGAGAA ACCGCGCCGCGAACGCCCAGCCAAACCGGTCGATACCTGGAAGCTGGAAGATTTCGTGGTCGAGCCAGCCGAAGGCAAGACGCGCTTCCATGACTTCAAG CTCGCCCCCGAGCTGATGCACGCCATCCACGACCTCGGCTTCCCCTACTGCACGCCGATCCAGGCCGGCGTACTGGGCTACACCCTCAAGGGCCAGGACG CCATCGGCCGCGCCCAGACCGGCACCGGCAAGACCGCCGCGTTCCTCATCTCGATCATCACCCAGTTGCTGCAGACCCCGGCGCCGAAAGAGCGCTACAT GGGCGAGCCACGCGCACTGATCATCGCGCCGACCCGCGAGCTGGTCGTGCAGATCGCCAAGGACGCCGCCGAGCTGACCAAGTACACCAAGCTCAACGTC ATGAGCTTCGTCGGCGGCATGGACTTCGACAAGCAGCTCAAGCAGCTGGAATCGCGTTTCTGCGACATCCTCGTGGCCACCCCGGGCCGTCTGCTGGACT TCAACCAGCGCGGCGAGGTGCACCTGGACATGGTCGAGGTGATGGTCCTGGACGAAGCCGACCGCATGCTCGACATGGGTTTCATCCCGCAGGTGCGCCA GATCATCCGCCAGACCCCGATGAAGGGCGACCGCCAGACCCTGCTGTTCTCCGCCACCTTCACCGACGACGTGATGAACCTGGCCAAGCAGTGGACGGTC AACCCGGCCATCGTCGAGATCGAGCCGGAGAACGTCGCCAGCGATACCGTCGAACAGCACGTCTACGCCGTCGCCTCCGCGGACAAGTACAAGCTGCTTT ATAACCTGGTGACGCAGAATGCCTGGGACCGGGTGATGGTCTTCGCCAACCGCAAGGACGAAGTACGCCGCATCGAGGAACGCCTGACCCGCGACGGCGT CAGCGCCGCGCAGATGTCGGGTGACGTACCGCAGCACAAGCGTATCAAGGTGCTCGAAGGCTTCCGCGCCGGCCATATCCGCGTGCTGGTGGCCACCGAT GTGGCCGGCCGCGGCATCCATGTCGACGGCATCAGCCACGTGATCAACTTCACCCTGCCGGAAGATCCGGACGACTACGTGCACCGCATCGGCCGTACCG GCCGCGCCGGCACCAGCGGTACCTCGATCAGCTTCGCCGGCGAGGACGACGCCTTCGCCCTGCCGCCGATCGAAGCGCTGATCGGTCGCAAGATCCAGTG CGAGATGCCGCCGGACGAACTGCTCAAGCCGGTGCCGCGCAGGCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGTTTGGCAGACAAAAAAGGCGAAGCCATCCAGCTTCGCCTTTTTCATTTATCCAGTTGGTTTGATACGTCATGCAACAGTGCGACTACCTCATCATC GGCGCCGGCATTGCCGGGGCTTCCACCGGTTACTTCCTCGCCAGCCACGGCAAGACGCTGCTGCTCGAACGCGAGGCGCAGCCCGGCTATCACGCCACCG GCCGCTCGGCAGCGCTGTATACCGTGGCCTACGGCACGCCACAGGTCCGCGCGCTGACGGCCGCCAGCCGAGCCTTTTACGATGCCCCGCCAGCCGGTTT CGCCGAGCACCCGCTGCTCACCCCACGCGGCGAACTGGTGGTGGATTTCAGTGGTGACGCCGCGGAGCTGCAGCGCCAGTACGAGCAGGCCCGTGAGCAT GTTGCAGAGGCTCGTCTGATCAGCGCCGACGATACCTGCGCTATGGTTCCGGTGTTGCGCCGCGAGCTCGTGCACGGTGCGCTGTTCGACCCCAGCGCCG
Amino Acid Sequence
>ATP-dependent RNA helicase RhlB
MLKALKKMFGKAEDEQPQPAPSPATAPARNSGADDKPPRKNKPARNAGETTGESPAAQQPRPPKAEKPRRERPAKPVDTWKLEDFVVEPAEGKTRFHDFK LAPELMHAIHDLGFPYCTPIQAGVLGYTLKGQDAIGRAQTGTGKTAAFLISIITQLLQTPAPKERYMGEPRALIIAPTRELVVQIAKDAAELTKYTKLNV MSFVGGMDFDKQLKQLESRFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPMKGDRQTLLFSATFTDDVMNLAKQWTV NPAIVEIEPENVASDTVEQHVYAVASADKYKLLYNLVTQNAWDRVMVFANRKDEVRRIEERLTRDGVSAAQMSGDVPQHKRIKVLEGFRAGHIRVLVATD VAGRGIHVDGISHVINFTLPEDPDDYVHRIGRTGRAGTSGTSISFAGEDDAFALPPIEALIGRKIQCEMPPDELLKPVPRRH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site