Pseudomonas mendocina NK-01, MDS_3057

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas mendocina NK-01 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GAATTCCACGGGCGACTGGGCTATCGCGCCTACGAAGGCGTGGCGCTGGATCTGGACGAACGCGTGCGTATCCAGGCCTCGCTGGGCGACAACATTGCCC TGCTGCTGCGCCACCACGGCCTGCTCAGCGTCGGCGCCAGCGTCGCCGATGCCTTCTACGTCATGCACTACCTGAATCGCGCCTGCGAGATTCAGCTCGC CGCCACCGGCGGTGGCCAACCCTGCAGCGAGATTCCGACGCACCTGGCGCAACACGCCTGCGAGCAGTTGCAGGGCGCCGAATGGCAGCGCCAGCTGATC TGGAAGGCCTGGCTGCGCAAGCTCGATCGCCTCGATTCCAGCTACCGCGACTGATGAGCACACCGCGCCAACCCTTATGAACCGCGGCTTGCAGCCTTAC TTTAGGTAATCCTGAAGTAAGTTTTTGCCCCAGCCGATTTTTCCCAGCCCCTGGCCGGTCAAGACTCCGGCCACAACCAGAACGAGCCTGAGGCCTACCC
DNA Sequence for Gene
>MDS_3057
ATGGACAAGACCTTCCACCAGCCCCTGGGCGGCAATGAAATGCCCCGCTTCGGCGGCATCGCCACCATGATGCGCCTGCCCCATATCCAGAGCCCCGAGG AAAAACGCCAGCTCGACGTCGCCTTCGTCGGCGTGCCGCTGGACATCGGCACCTCGCTGCGCTCCGGCACCCGCTTCGGCCCGCGCGAGATCCGCGCCCA GTCGGTGATGATCCGCCCGTACAACATGGCCACCGGCGCCGCCCCCTTCGACTCGCTGAACGTGGCCGACATCGGCGACGTGGCGATCAACACCTTCAAC CTGCTCGACGCCGTACGCATCATCGAAGAGGCCTACGACGAGATCGTTGAATTCGGCATCAAGCCGCTGACCCTGGGCGGCGACCACACCATCACCCTGC CGATCCTGCGCGCCCTGCACAAGAAGTACGGCAAGATCGGCCTGGTGCACGTCGATGCCCACGCCGACGTGAACGATCACATGTTCGGCGAGAAGATCGC CCACGGCACCACCTTCCGCCGCGCCCAGGAAGAAGGCCTGCTCGACAGTGAGCGCGTGGTGCAGATCGGCCTGCGCGCCCAGGGCTATACCGCCGAGGAC TTCAACTGGAGTCGTAAGCAGGGCTTCCGCGTGGTGCAGGCCGAAGAGTGCTGGCACCAGTCGCTGGCGCCGCTGATGGCCGAAGTGCGCGAGAAGGTCG ACGGCGGCCCGGTGTACCTGTCCTTCGACATCGACGGCATCGACCCGGCCTGGGCGCCCGGCACCGGCACCCCGGAAATCGGTGGCCTAACCACCATCCA GGCCATGGAGATCATCCGTGGCTGCGACGGCCTGGATCTGATCGGCGCCGACCTGGTGGAGGTCTCGCCGCCCTACGACACCACCGGCAACACCTCGCTG CTGGGCGCCAACCTGCTCTACGAAATGCTCTGCGTGCTTCCTGGAGTCCAGCGTCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCACGGCTTTTCAATACCCGCACGGGTGTCCTTGAAGGCACCCGGCAAACAACAACAATTAGGGTGCCCTTATGAATCACGAAGACGCTGCTCCAACAC TGAATAAGCAGCCACCAGTCACCGACCGTGTCGCGCAACCCTATAGCCTGCGCCAGTTTCTGATCTTCCTGATCCCGTCGCTGCTCGGCGTGCTGCTGTT TCTGACTCCCATCGTCTATGAGGAGAAGGTAACCATCGGCCTCGGCGTCATGGCCGACGCGCTCAAGGCTGCGGTCAACGACCATCTGCCCGCCATTGCC ACCACCCTGCTGATCCTCTCGGCGGTACTGGGCGTACTTGGCAGCCTGCTCAAGCCGCGCTGGATCACAGAGCGCCGCGCGCTGGATGATCTGTTCAACC TCCACCCACTCTGGCTCGGCCTGCGCGTGGTCGGCGCGCTGTTCGCAGCCATGACCTTCTGGCAGTTCGGCCCTGAATGGGTCTGGAGCGCCAACACTGG
Amino Acid Sequence
>putative agmatinase
MDKTFHQPLGGNEMPRFGGIATMMRLPHIQSPEEKRQLDVAFVGVPLDIGTSLRSGTRFGPREIRAQSVMIRPYNMATGAAPFDSLNVADIGDVAINTFN LLDAVRIIEEAYDEIVEFGIKPLTLGGDHTITLPILRALHKKYGKIGLVHVDAHADVNDHMFGEKIAHGTTFRRAQEEGLLDSERVVQIGLRAQGYTAED FNWSRKQGFRVVQAEECWHQSLAPLMAEVREKVDGGPVYLSFDIDGIDPAWAPGTGTPEIGGLTTIQAMEIIRGCDGLDLIGADLVEVSPPYDTTGNTSL LGANLLYEMLCVLPGVQRR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site