Pseudomonas stutzeri A1501, PST_1804
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri A1501 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCTGTAGCGCGAGCCATCAGGCGCAGGTGGGCGAGGACATCATCACGCGTCATCTGTCCATCTGCATGCCCGCAGGACCAGGCGTAACCTGAGCTGGTGG TGGCCAGGGCCTTGAAGCCTAGGCTGGCGAGAGCCGCTGCGCTACCGACATCCCAGGGGTTGGGCAATACGAAGCAGCCCGAACGGTGAAGTTCGCGGAA AATGGCTCGTTTCTCGGACTGGCTGCGTTCGACCATGGGTACCTCGGCTGGCTGGTGGGCGCGCCGGATCGCATGCCGGCGCGGTTAAGCGTAGATGGTG CGCTGCGACTTGGCATTCGTGCCTGATTTCGGTGCGTCGAGACGATCGCTGCGCCTTTCTGGAGCGTACTGCACGTATTTGCAGCCTGCCCAGGCGGGTA GCCTGACGCAAACAGGCTGGAGCGTTTCTTGCTCGGTGATGGCTTTCTGCCTTTTCGCAGCCGACCGTACGGTCACGCGAAACACCTCAAGCCCGAAACG
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| DNA Sequence for Gene |
>PST_1804
ATGATCGATAAATCCGCCAACCGCCGCAGCAGCCTGCTCACCTGCGAGGTCCTAGACCGCTCTCGCGTACTCGATACCCTGGTCAACAACCTGGAAGGAA TGGCCTATCGCTGCCGTAACGATGCGTCGTGGACGATGATTTTCGTCAGCCAGGGCTCGCTGGGGTTGTGCGGCTACAGCGCCGCGGCCCTGGTGGATGA CGCGGAGGTATCGTGGGAGCAGATCACCCATCCGGATGATCGCGCGCGGGTGCGCCGCAGTATCGATGGAGCCATCGCCGCCCTTGGCCGCTTCACCGTG CATTACCGGATCCGCACCGCGGCGGGTTTCATCAAATGGGTCATCGAGCGCGGCGTCGCGGTGCCGGACGAGCAGGGCGAAATCGTCGTCGAAGGCTTCA TCGAAGACATCACCGCCCAGCGCGCCGTGCTCGAGGCGCTGGAGCAGGCGGAGCTGCGCTATCGCAGCATCTTCGAGAACGCCTCGGAGGGGATCTTCCA GTCGACCCGCGATGGGCGCTACCTGGCTGCCAACCCCGCGCTGGCCCGTATCTATGGCTACGACAGCGCCTCCGAGCTGGTTGCCGACCTGGCGGACATC GAGCGTCGTCTGTACGTCCAGCCGGGGCGGCGCGAGGCGTTCTGCCAGCTGATGGAGCAGCATGGCGAGGTGCTCAACTTCGAGTCAGAGGTCTACCGGC GCGATTGCACGCGCATCTGGATTTCCGAGAACGCCCACGTGGTGCGCGGCCCCAATGGCGAGTTCATCTGCTACGAGGGCACGGTGCAGGACATCTCCGA GCGCAAGCATTACCAGCAGCAGTTGGAGCGGCAGGCCAACCACGACCTGCTGACCGGTCTGCCCAACCGCATACTGCTCAACGACCGGATCGAGCAGGGC TTGGCGCGGGCGGCACGCCTGGGCTACTACCTGACGCTGGTGTTCATCGACCTGGACAACTTCAAGTTCATCAATGACGGCCTCGGCCATGTCGCTGGCG ACGAGCTGCTCAAGAGCATCGCGGCGCGCCTGGCCGGCAGCCTGCGCGGCTCCGACACCGTGGCGCGGGTGGGGGGCGACGAGTTCGTGCTGGTGCTAGG AGACCATTACCGCATCAGTACCGTGATCTCCTTGCTCGAGCGCGTGCTGAACGAGATTCGTCGCCCTGTGACCCTTGCCGGGCGCGAATTCCAGGTTGGC GCCAGCCTCGGCGTGGCGATGTTCCCGGATGACGGAGAGGATGCGCAAACCCTGCTCAAGCATGCCGATATCGCCATGTACGCGGCGAAGAAACGGGGAC GCAACAACTTCCAGTTCTTCACCCATGACCTCAACCGCATCGCCGATGAGCGTCTGAATCTCGAGGCTGCGATGCGCACCGCACTGGAGCGCGACGAGTT CGCGGTGCATTACCAGCCGAAGGTGGATGCCCAGCGGCGCATCGTCGGCTTCGAGGCGCTGGCCCGCTGGACACACGCCGACCTTGGGGTGATCGGCCCC GATCGCTTCGTGCCGGTGGCCGAGGAAAGCGGCCTGATCATGCCCCTGACGCTGGCCGTGCTGCGCCGCGCATTCAGCGACGCCCGGCGCTGGAATGCGG GACGCCAGGTACCGCTGCTGGTGGCGGTGAACCTCTCACCGCTGCTGTTTCTCGGCGACGATGTGGTCGAGCGGGTCATGGCGGTGCTCGACGAGGTGGG ATTGTCGCCGCTGCTCGTCGAACTGGAGATCACCGAAACGGTGTTTCTCGGCGATGGCAGCCGCGCCGTATCCATTCTTGCCGACTTCAAGGCACGCGGC TTTCGCCTGGCCATGGATGATTTCGGCACCGGTTACTCGGCGCTCGGCTATCTGCGGCGGTTCCCGCTGGACATCATCAAGATCGACCGTTCGCTGGTCA CCGGTCTCGAGCAGGAGGACGAGGTGGCGATGATCGCCCGCGCCGCCATCTCGCTGGGCAAGAGCCTGCACAAGACCGTGGTCGCCGAAGGCGTAGAGAA CGCCGCGCAATTCGAGTTCCTGCGCCACAACGGCTGTGACGAATTCCAGGGTTACCTGCTGTCGCGGCCGTTGCCGGCGACGGGAATCGACGCGCTGCTT GCCGCAGGGGACGAGCTGCGCTTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGTTCGCTCAGCCTGGCGGATCGGGGATCGCGCCGTCCTGCCAGAGCCGCAGCAGCTCCTTTGGCGCGCGCTCCTCGGCGATCTGCAGGATCATCTCGG CATCGCTGTCCTCGCGGCGATAGTGCAGTTCGACCTTGAAGAAACGCTGGTCGCCACGACCGACGTCCTTGCTGGCGACCGGCAGGCAGCGCTCCACAAC CGAGCAGAGGCCACGGCGCTGCGCCGGGTCGCAGTCGGCGAATTCGATCTGCCGGGGGCGGGCGAGCGCTGGCGCGGCAACGAGACCGCCCTGGCGCGAG ATCCGCAAGGATGTTTCAGGGCCCAGGGCCGGCATCTTCATGTTGCCTCCTCAGCGCGGTGAAACGCCGACCTGCAGCCATGCCTGCTGCACGGCTTCGG CTTCGCTGGAGCCGCGGCCGAACAGGCGCGTCGCCTGTTGCAGCGTGACGCCTGCAAACGTCGCGAAATCGGCATCGTTGGGTAGTTGCGGGTCGCAGAT
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| Amino Acid Sequence |
>sensory box/GGDEF family protein
MIDKSANRRSSLLTCEVLDRSRVLDTLVNNLEGMAYRCRNDASWTMIFVSQGSLGLCGYSAAALVDDAEVSWEQITHPDDRARVRRSIDGAIAALGRFTV HYRIRTAAGFIKWVIERGVAVPDEQGEIVVEGFIEDITAQRAVLEALEQAELRYRSIFENASEGIFQSTRDGRYLAANPALARIYGYDSASELVADLADI ERRLYVQPGRREAFCQLMEQHGEVLNFESEVYRRDCTRIWISENAHVVRGPNGEFICYEGTVQDISERKHYQQQLERQANHDLLTGLPNRILLNDRIEQG LARAARLGYYLTLVFIDLDNFKFINDGLGHVAGDELLKSIAARLAGSLRGSDTVARVGGDEFVLVLGDHYRISTVISLLERVLNEIRRPVTLAGREFQVG ASLGVAMFPDDGEDAQTLLKHADIAMYAAKKRGRNNFQFFTHDLNRIADERLNLEAAMRTALERDEFAVHYQPKVDAQRRIVGFEALARWTHADLGVIGP DRFVPVAEESGLIMPLTLAVLRRAFSDARRWNAGRQVPLLVAVNLSPLLFLGDDVVERVMAVLDEVGLSPLLVELEITETVFLGDGSRAVSILADFKARG FRLAMDDFGTGYSALGYLRRFPLDIIKIDRSLVTGLEQEDEVAMIARAAISLGKSLHKTVVAEGVENAAQFEFLRHNGCDEFQGYLLSRPLPATGIDALL AAGDELRF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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