Pseudomonas stutzeri A1501, PST_0109
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri A1501 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCATGTCGAGAGTCTGTCAAGTTACCGGTAAGGGTCCGGTAACCGGGAACAACATTTCCCACGCGAACAACAAAACCCGTCGTCGTTTCCTGCCGAACCT GCAGCATCATCGCTTCTGGGTCGAGTCCGAGAAGCGCTTCGTGCGTCTGCGCGTCTCCGCCAAGGGCATGCGCGTTATCGATAAGCGTGGCATCGACGTC GTTCTGGCCGAGCTGCGCGCCCGCGGCGAAAAGGTTTAAGGAGAGCAATCATGCGTGACCTGATCCGTTTGGTGTCCAGCGCCGGTACCGGCCACTTCTA CACCACCGACAAGAACAAGCGCACCACCCCCGACAAGATCGAAATCAAGAAATTCGATCCGGTCGTTCGCAAGCACGTGATCTACAAGGAAGCCAAGATC AAGTAATTGATCGGCCCTTGAAGGAAGAACCCGCCTCACGGCGGGTTTTTTCGTTTATGGGCCGGCACCTGGCGCCCCGTTCGTCAGCGCTCCGGGTAAT
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| DNA Sequence for Gene |
>PST_0109
TTGACAAGAGTCATATGCTCCCCACGGAAATTCGCTATCGTACGAGCTTCCCTTTCTCCCACTTTTCGGCACGAGGATGCGCAGCGCATGGCGAAGACGG ACGGGCCCATCGCGGCAGACAGCAAGAGCACTTCCAGCATCGCCCTGCAGGCGGCTTCCGAGGACATCTGGTCGCAGAAATACCGCCTGAGCAGCAAGGA CGGCACGCCCATCGACCAGACCGTCGATGACACCTGGCAGCGAGTCGCCCGTGCCCTGGCCGACGTCGAACCGGCCAAGCAGCGTGAGCACTGGTACGAG CGCTTCCTCTGGGCGCTGCGCAATGGCGCCATCCCGGCCGGGCGGATCATTTCCAACGCCGGCGCGCAGGACTACAAGCCGGCCACCTCGACCATCAACT GCACCGTCTCCGGCTCGATCACCGACTCGATGGACGACATTCTCGGCAAGGTCCACGAGGCCGGGCTGACGCTCAAGGCCGGCTGCGGCATCGGCTACGA GTTCAGCACCTTGCGTCCGCGCGGCTCGTTCGTTTCCGGCGCCGGCGCGCACACCAGCGGCCCGCTGTCGTTCATGGATATCTTCGACAAGATGTGCTTC ACCGTGAGTTCGGCCGGCGGCCGCCGCGGCGCGCAGATGGGTACCTTCGACGTCGGCCATCCGGACGTGCGCGAGTTTATCCGCGCCAAGCGCGAGGACG GCCGCCTGCGTCAGTTCAACCTGAGCCTGCTGATCACCGACGAGTTCATGCAGACCGTCGAGGCCGACGGCGAATGGCCGCTGATCTTCCCGGTGCATGC CAAGGAAGCCGCCGAGCTGGATCTGGCCGACGATGCCCAGGTGATCTGGCGCGAATGGCCGGTGCACGACGGCTACATCGTGCGCGACGATGGCCTGGTG GCCTGCAAGATCTACGGGCGGGTCAAGGCTCGGCATCTGTGGGACATGATCATGGTCTCCACCTACGACTACGCCGAGCCAGGCTTCATCCTCATCGACC GGGTCAACCAGCTGAACAACAACTGGTGGTGCGAGGCGATCCGCGCGACCAACCCCTGCGGTGAGCAGCCGCTGCCGCCATACGGCTCCTGCCTGCTGGG CTCGATCAACCTGACCCACTTCGTCATCGACCCGTTCGGCGTCGAAGCGCGCTTCGACTGGGACAAGTACCGCGAAGTGGTGCGCGTCTTCACCCGCATG CTGGACAACGTCGTCGAGATCAACGGCCTGCCGCTGGAGCAGCAGCGCCACGAGATCGAGAGCAAGCGCCGCCACGGCATGGGCTTCCTCGGTCTCGGCT CGACCCTGACCTTGCTCAAGCTGCGCTATGGCAGCCCGGAAGCCTGCGTGTTCACCGAGGAAGTTTCCCGCGAGATGGCGCTGGTCGGCTGGGAGCAGGC GCTGGAGCTGTCGAAGGAGAAGGGCCCGGCGCCGCTGTTGAGCCAGAACTTCGAGGTTACCGCAGAGATGCTGCGCAAGCGTCCGGAGATGGCCAAGGAC GGCTACAAGGTTGGCGACCAGATTGCCGGTCGTGTGCTGCACGCCAAATACTCGCGGTATATGCAGAAGATCGCCGAGTACGCGCCCGATCTGATCGAGG CACTGGCCGAGCAGGGCGCGCGCTTCACCCACCACAGCTCCATTGCGCCCACCGGCACCATCAGCCTCAGCCTGGCCAACAACGCTTCCAACGGCATCGA GCCGAGCTTCGCCCATCACTACTCGCGCAACCTGATCCGTCCGGGCCGCAAGGCCAAGGAGAAGATCGAGGTGTTCAGCTACGAGCTGCTGGCCTATCGC ACGCTGATCAATGCACGCGCCAAGCCCGGCTCCGACGAGCCGGGCGAGAAGCTGCCGGACTACTTCATCACCGCCGATGATGTCAGCCCGACCCAGCATG TGGACATCCAGGCCGCGGCGCAGAAGTGGGTCGACTCATCGATCTCCAAGACCGCCAACGTGCCGACCGACTACCCGTTCGAAGCGTTCAAGGACATCTA TCGCTACGCCTGGCGCCAGGGCCTCAAGGGCTGCACCACCTTCCGCTTCAACCCGGCGGCATTCCAGGGCGTGCTGGTCAAGGAGGCCGACCTGGAGAAG ACCCTGTACCGCTTCACCCTTGAAGACGGCAGCGTGGTCGAGCTCAAGGGCAACCAGGAAGTCGAGTACGACGGCGAGGTGAACACCGCCGCCAACCTCT TCGACGCCCTCAAAGAAGGCTACTACGGCAAGTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCCGCCTGAACCGCTTGTACGCCGGGCCGTTCATGGCCCGGCAGGAGAGATTGCACAATGACCGTAAAGATCACCCAGCGCATCAAGGGCTTCAAGGTC GTCGACGAGACCCTCGAGCGTCCCGCGACCGCCACCAGCGGCAGCGATGGCACGGCGAGCAAGGCCGTCAACGTGGTGGAGATGGACGAGAGCCTGCAGC GCCCGGAAACCCTGATCGGCATGACCTACAAGATCAAGTCGCCGCTGTTCGAACATGCGCTGTACGTCACCGTGAACGACATCGTGCTCAACGCTGGCAC GCCGCACGAGCAGCGCCGGCCGTTCGAGATCTTCATCAACTCGAAGAACATGGACCACTTCCAGTGGATCGTCGCGCTTACCCGGATCATGTCCGCAGTG TTCCGCAAGGGTGGTGACTGCACCTTCCTTGTCGAGGAGCTCAAGGCGGTGTTCGATCCGCGTGGCGGCTACCTGAAGAAAGGTGGCGTCTACATGCCCT
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| Amino Acid Sequence |
>ribonucleotide reductase, alpha subunit
MTRVICSPRKFAIVRASLSPTFRHEDAQRMAKTDGPIAADSKSTSSIALQAASEDIWSQKYRLSSKDGTPIDQTVDDTWQRVARALADVEPAKQREHWYE RFLWALRNGAIPAGRIISNAGAQDYKPATSTINCTVSGSITDSMDDILGKVHEAGLTLKAGCGIGYEFSTLRPRGSFVSGAGAHTSGPLSFMDIFDKMCF TVSSAGGRRGAQMGTFDVGHPDVREFIRAKREDGRLRQFNLSLLITDEFMQTVEADGEWPLIFPVHAKEAAELDLADDAQVIWREWPVHDGYIVRDDGLV ACKIYGRVKARHLWDMIMVSTYDYAEPGFILIDRVNQLNNNWWCEAIRATNPCGEQPLPPYGSCLLGSINLTHFVIDPFGVEARFDWDKYREVVRVFTRM LDNVVEINGLPLEQQRHEIESKRRHGMGFLGLGSTLTLLKLRYGSPEACVFTEEVSREMALVGWEQALELSKEKGPAPLLSQNFEVTAEMLRKRPEMAKD GYKVGDQIAGRVLHAKYSRYMQKIAEYAPDLIEALAEQGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYSRNLIRPGRKAKEKIEVFSYELLAYR TLINARAKPGSDEPGEKLPDYFITADDVSPTQHVDIQAAAQKWVDSSISKTANVPTDYPFEAFKDIYRYAWRQGLKGCTTFRFNPAAFQGVLVKEADLEK TLYRFTLEDGSVVELKGNQEVEYDGEVNTAANLFDALKEGYYGKY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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