Pseudomonas stutzeri A1501, PST_0109

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0031419	cobalamin binding	ISM Inferred from Sequence Model Term mapped from: InterPro:cd02888	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	ISM Inferred from Sequence Model Term mapped from: InterPro:cd02888	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0000166	nucleotide binding	ISM Inferred from Sequence Model Term mapped from: InterPro:cd02888	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	psa00240	Pyrimidine metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	psa00230	Purine metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	psa01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR01183	Ribonucleotide reductase large chain signature	IPR000788	Ribonucleotide reductase large subunit, C-terminal	539	566	1.5E-17
Pfam	PF02867	Ribonucleotide reductase, barrel domain	IPR000788	Ribonucleotide reductase large subunit, C-terminal	134	680	0.0
PRINTS	PR01183	Ribonucleotide reductase large chain signature	IPR000788	Ribonucleotide reductase large subunit, C-terminal	423	445	1.5E-17
NCBIfam	TIGR02504	JCVI: adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	IPR013344	Ribonucleotide reductase, adenosylcobalamin-dependent	55	689	0.0
PRINTS	PR01183	Ribonucleotide reductase large chain signature	IPR000788	Ribonucleotide reductase large subunit, C-terminal	451	474	1.5E-17
FunFam	G3DSA:3.20.70.20:FF:000040	Vitamin B12-dependent ribonucleotide reductase	-	-	23	683	0.0
PRINTS	PR01183	Ribonucleotide reductase large chain signature	IPR000788	Ribonucleotide reductase large subunit, C-terminal	347	358	1.5E-17
PANTHER	PTHR43371	VITAMIN B12-DEPENDENT RIBONUCLEOTIDE REDUCTASE	-	-	38	739	0.0
SUPERFAMILY	SSF51998	PFL-like glycyl radical enzymes	-	-	44	719	0.0
Gene3D	G3DSA:3.20.70.20	-	-	-	16	683	0.0
PRINTS	PR01183	Ribonucleotide reductase large chain signature	IPR000788	Ribonucleotide reductase large subunit, C-terminal	385	408	1.5E-17
PRINTS	PR01183	Ribonucleotide reductase large chain signature	IPR000788	Ribonucleotide reductase large subunit, C-terminal	208	227	1.5E-17
CDD	cd02888	RNR_II_dimer	IPR013344	Ribonucleotide reductase, adenosylcobalamin-dependent	99	682	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.