Pseudomonas stutzeri A1501, PST_0004 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri A1501 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTCTTCGAGACCACGCTCAAGGCGCTGTTGGACCTGGATGGCCTGACGCTGAGCTATTACCGCGGTTGGGACAAGGATCGGCCACTGGTCGATGTACTGG CTTCGTCACTGGAGCGCGATCGCGCAATGGGCCATACGCAATCTGGCCCGCAGCGCGCGGATCTGCGACTCAAGGTTGGCAGTCATAACGCGGCTGAAGT GTTGTCGCGTGGGCAACAGAAGCTGGTGGTGTGTGCGTTGCGCATTGCCCAAGGTCATCTCGTCAGCGAGGCCAAGCGCGGGCAATGCATTTATCTGGTC GACGACCTGCCCTCGGAGCTGGATGCGCAGCACCGACTGGCGTTGTGCAGGTTGCTCGAACAGCTGAACTGTCAGGTGTTTATTACCTGCGTCGATTCAA CCGTTTTGCAAGAAGGCTGGGGTGAACAGACACCAGTCTCAATGTTTCACGTGGAACATGGGCAAATCACCCAGCTCCACGGCCCCTCGGGAGTGAAGGC
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| DNA Sequence for Gene |
>PST_0004
|gyrB
ATGAGTGAGAACCACACGTACGACTCTTCGAGCATCAAGGTACTGAAAGGTCTTGATGCCGTGCGTAAGCGCCCTGGCATGTATATCGGCGACACCGATG ACGGCACCGGCCTGCACCACATGGTCTTCGAAGTCGTCGATAACTCGATCGATGAAGCGCTGGCCGGCTACTGCAGCGATATTTCCATCACCATCCATAC CGATGAATCCATCACCGTGCGCGACAACGGCCGCGGCATTCCGGTGGATATTCACGAAGAAGGCGTATCGGCAGCCGAGGTCATCATGACCGTGCTGCAC GCAGGCGGTAAGTTCGACGACAACTCCTACAAGGTATCCGGTGGCCTGCACGGCGTGGGTGTCTCGGTGGTGAATGCATTGTCCGAGGAGCTGCTGCTGA CCATCCGTCGCGAAGGCAAGGTGTGGGAACAGCTCTATCGCCATGGCGTCCCGCAAGCCCCGCTCGCGGCCGTGGGCGAGACCGATACGTCGGGCACGCA GATCCATTTCAAACCATCCGCCGAGACCTTCCAGAACATCCATTTCAGCTGGGACATTCTGGCCAAGCGTCTTCGCGAACTGTCCTTTCTCAACTCCGGG GTGGGTATCGTCCTGCGCGACGAGCGCACGGCCAAGGAAGAACTGTTCAAGTACGAAGGTGGCCTCAGCGCCTTCGTCGCCTACCTGAACACCAACAAGA CCGCGGTGAATCAGGTGTTCCACTTCAACGTCCAGCGTGACGATGGCGTCGGCGTCGAAGTCGCGCTGCAGTGGAACGACAGCTTCAATGAGAACATCCT CTGCTTTACCAACAACATTCCCCAGCGTGACGGCGGCACTCACCTGGCCGGCTTCCGCTCCGCACTGACGCGTAACCTGAACAACTACATCGAGCAGGAA GGCCTGGCGAAGAAGCACAAGATCGCCACCACCGGTGACGACGCGCGTGAAGGTCTGACCGCGATCATCTCGGTCAAGGTGCCGGATCCGAAGTTCAGTT CGCAGACCAAGGACAAGCTGGTTTCCTCCGAGGTGAAGACCGCGGTGGAACAGGAGATGGGCAAGTACTTCGCCGACTTCCTGCTGGAGCATCCAAACGA GGCGAAGGCGGTAGTCGGCAAGATGATCGATGCTGCCCGCGCCCGTGAGGCTGCGCGCAAGGCACGGGAAATGACCCGGCGCAAAGGCGCGCTGGATATC GCCGGCCTGCCGGGCAAGCTTGCCGACTGTCAGGAGAAGGATCCTGCGCTGTCCGAACTGTACATCGTGGAGGGTGACTCCGCGGGTGGCTCGGCCAAGC AGGGCCGCAACCGCAAGACCCAGGCGATCCTCCCGCTCAAGGGCAAGATCCTCAACGTCGAGAAGGCACGCTTCGACAAGATGCTCTCGTCCCAGGAAGT CGGCACGCTGATCACCGCGCTGGGTTGCGGCATCGGCCGCGAGGAATACAACATCGACAAGCTGCGGTACCACAACATCATCATCATGACCGATGCTGAC GTCGACGGTTCGCACATCCGGACCCTGCTGCTGACCTTTTTCTTCCGCCAGTTGCCCGAGCTGATCGAGCGTGGCTACGTGTATATCGCGCAACCGCCGC TGTACAAGGTCAAGCGCGGCAAGCAGGAGCAGTACATCAAGGACGACGAGGCGATGGAGGAATACCTCACCCAGTCGGCCCTCGAAGAGGCCAGCCTGCA CGTCAACGAGGACGCCCCAGGCCTTGCCGGCGAAGCACTGGAAAGGCTGGTCAACGACTACCGTACGGTGATGAAGACTCTGCAGCGCCTGTCGCGGCTG TACCCTCTGGAGCTGACCGAGCACTTCATCTATCTGCCTCGGGTTACGCTCGAGCAGCTGGCTGACCACTCTGCGATGCAGGCGTGGCTCGAGCAGTACA GCGCGCGACTCAAGGCCGGTGAGCGGTCCGGGCTGATCTACAACCTCAGCCTGCGCGAGGACAAGGAACGCCACCTGTGGCTCCCGGAGGTGGAGATCAG CTCCCACGGCCTGGCCAGCTACATCACCTTCAACCGTGATTTCTTCGGCAGCAACGATTACCGCACGGTGACCGCGCTGGGCGAGAAGCTCAACAGCCTG CTGGAAGAAGGTGCCTACGTGCAGCGTGGCGAGCGCAAGAAGCCGGTCGCCAGCTTCAAGGAAGCGCTGGACTGGCTGATGAACGAGGGCACCCGTCGAC ACAGCGTTCAACGCTACAAGGGTCTCGGCGAGATGAACCCGGACCAACTGTGGGAAACCACCATGGACCCGAACGTGCGGCGCATGCTCAAGGTGACGAT CGAAGACGCCATCGCGGCGGACCAGATCTTCAACACGCTGATGGGCGATGCAGTGGAGCCCCGCCGGGAGTTCATCGAAACCAACGCACTGGCGGTCTCG AATCTGGACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCGGTGCGTGTAGATCCAGTGTTATGCAAAAAGGAACCCCGGCCTCGGCCGGGGTTTTCATTTTCAGCATAGGCAGATCAAATCGAAGCGACTGTTTTA ATCAATTTCGGAATAGCCCTACTGCGGAGTAGAGTTTGCCCCATTCGAGTCATTCATCTTAAGAGCCCTCAGGGCCAATACACTTTGACGGGGTAAGTCG CCAATGTTGGATTCCAATCTCAAGACCCAGTTGAAAGCCTACCTGGAGAAGGTCACCCAGCCCTTCGAGATCGTCGCGTCCCTCGATGACGGCGAGAAAT CCCGGGAGCTGCTGAGCCTGCTGCAGGACATCGCCGGCCTCAGCGACAAGATCACCTTGAAGACCGACGGCGACGATGCGCGCAAGCCGTCGTTCTCGCT CAACCGCATCGGCGGCAACATCAGCCTGCGTTTCGCCGGCATCCCCATGGGCCACGAATTCACCTCGCTGGTGCTGGCCCTGCTGCAGGTCGGCGGGCAC
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| Amino Acid Sequence |
>DNA gyrase subunit B
MSENHTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSDISITIHTDESITVRDNGRGIPVDIHEEGVSAAEVIMTVLH AGGKFDDNSYKVSGGLHGVGVSVVNALSEELLLTIRREGKVWEQLYRHGVPQAPLAAVGETDTSGTQIHFKPSAETFQNIHFSWDILAKRLRELSFLNSG VGIVLRDERTAKEELFKYEGGLSAFVAYLNTNKTAVNQVFHFNVQRDDGVGVEVALQWNDSFNENILCFTNNIPQRDGGTHLAGFRSALTRNLNNYIEQE GLAKKHKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADFLLEHPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDI AGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDAD VDGSHIRTLLLTFFFRQLPELIERGYVYIAQPPLYKVKRGKQEQYIKDDEAMEEYLTQSALEEASLHVNEDAPGLAGEALERLVNDYRTVMKTLQRLSRL YPLELTEHFIYLPRVTLEQLADHSAMQAWLEQYSARLKAGERSGLIYNLSLREDKERHLWLPEVEISSHGLASYITFNRDFFGSNDYRTVTALGEKLNSL LEEGAYVQRGERKKPVASFKEALDWLMNEGTRRHSVQRYKGLGEMNPDQLWETTMDPNVRRMLKVTIEDAIAADQIFNTLMGDAVEPRREFIETNALAVS NLDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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