Pseudomonas aeruginosa AZPAE12145, NQ06_RS11400
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd01347 | ligand_gated_channel | - | - | 62 | 880 | 4.17197E-87 |
| Gene3D | G3DSA:2.40.170.20 | - | IPR036942 | TonB-dependent receptor-like, beta-barrel domain superfamily | 181 | 880 | 2.0E-73 |
| PANTHER | PTHR47234 | - | - | - | 1 | 880 | 0.0 |
| Gene3D | G3DSA:2.170.130.10 | - | IPR037066 | TonB-dependent receptor, plug domain superfamily | 36 | 179 | 2.2E-35 |
| FunFam | G3DSA:2.40.170.20:FF:000043 | Uncharacterized protein | - | - | 281 | 880 | 0.0 |
| Pfam | PF07715 | TonB-dependent Receptor Plug Domain | IPR012910 | TonB-dependent receptor, plug domain | 58 | 170 | 1.8E-24 |
| Pfam | PF00593 | TonB dependent receptor | IPR000531 | TonB-dependent receptor-like, beta-barrel | 363 | 879 | 1.3E-53 |
| SUPERFAMILY | SSF56935 | Porins | - | - | 43 | 880 | 4.88E-107 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.