Pseudomonas aeruginosa AZPAE12145, NQ06_RS11400
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12145 AZPAE12145_contig_9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGAGCCCTGCCAGAAGGCCGTGGTCGCCGCCGAGGTGATGGTGATGCCGCGCTCCTGCTCCTGGACCATCCAGTCCATGGTCGCCGCGCCGTCATGGACC TCGCCCATCTTGTGGTTGACGCCGGTGTAGAAGAGGATCCGCTCGGTCGTCGTGGTCTTGCCGGCGTCGACGTGGGCGACGATGCCGATGTTGCGATAAA GCTCGATGGGAGTGGTGCGAGCCATGATCTGCCCCTTGGGTGCTGCCCTGGATGATGGGAACGACTGCTGAAAGAAAAATGTAGCTGAAGAAAGGACGCC GCAGCACCGCCGCGACGCCTGCTTTTCGACCTCGGCAGAGGGGACTGGTTCTGCCGCTCCGGCCCACCGACGAAAGGCGCGACGGCAGGGCTTGTTCCCA GCGGACATAAACTCATGGCGCAAAGGTCTAAGCCGTCCCTGGAAAATCCCCCGGCTCGACGGACATCCCTGGACACACCGGAACAAGGGATGCCCCGACC
|
|
| DNA Sequence for Gene |
>NQ06_RS11400
ATGCACCGATCGCTCCACACCGACGCGCCGCTGGGCGCCGCCCTGCTGCTGGCCCTGCAGCTCGCTCCCGGCAGCGCCGCCGCGGCGGAGGAACAGGCGC CTGTCGACCCGCCCACGGTCCAGTTGCAACGAATCGAGGTGACCGGCAGCGCGATCCGCCGGGTCGATGCGGAAACCGCGGTGCCGATCAGCGTCCTGCG CGCCGAGGAGCTGCGCCAACAGGGCGTGACCAGCACCGAGGAACTGATCGGCCGGCTTTCCGGCAACCAGGGCGTATACAACTCCAGTCGCTCGGTCGGC AGCGCCACCGGCGGCGCCTCGTTCGCCGACCTGCGCGGAATCGGCGCGAACAAGACCCTGGTGCTGCTCAACGGCCGGCGCCTGGCGAACAATGCCATCG ACGGCTCCGCGGTGGATCTCAACACCATTCCCTTCGCCGCCATCGACCGGGTCGAGGTGCTGCGCGACGGCGCCTCCGCGCTGTACGGCACCGATGCCAT CGGCGGGGTGATCAACTTCATCACCCGCAAGAGCCTGAACGAAGGCCGCTTCGACAGCGGCTACGCCTCCCCCACCCACGACGGCGGCGGCAACCAGCGC AACGTCAGCGCTAGCTGGGGCTTCGGCGAGCTGGAGGAGGATCGCTTCAATGTCTTCGCGGTGGCCAACTACGACAAGCAGGAGCGCCTCGGCGCCAAGG ACCGCGGCTACACCTACAACTACCAGCCGGGACGCGGCCTCGACTACAGTTCCGGAACCGCCTTCCCCGGCAACTGGAGCCAGGGCGCCAACGCCAGCAA TCCGCTGGCCGCCGGCGGTTGCAAGGGCGCCGACCTGATTCCGCGCAACGGCATCTGCCGGCAGAGCCTGTGGCGCTACCTCGACCTGGTGCCGGAAACC GAGAAGACCTCGGTGTTCAGCCGCGCCACCGGCAAGCTGGCCGACGAGCACAACGTCAGCCTGGAGTATTTCTGGTCGCGCAACGACAACGCTACCCAGG TCGGCCCAGGGACCCTCACCGGCCTGCAGATCGATCCCGGCACCGCCTTCTATCCCGGCAACGGCATCACTCCCGGACCCGGCGGCTTCGTCCTCGACCC GAGCCGGCCGGTGGAGGTCAACTGGCGACAGAGCGTGCTCGGGCCGCGCCTGCAATCCTCGCAGAACACCGGCCAGCGCCTGCTGCTCGGCTTCGACGGC CAGTTCGCCGACTGGGACTACGATATCGGCGCCTCGTACAACCAGAACAAGGTGGTCGACCATATCCACAGCGGCTACGTCGATGATCGCGCCGCCGCCC TCGGCATCGCCAACGGGACGCTGAACCCGTTCGGGCCGCAGACCGACGCCGGCCTCGCCTACCTCGGCAGCCATGCCCTGAGCGGCGACTTCCGTACCTC GGTCGGCCGCGTCAAGGGCCTGGACGCCCGCGCCAGCCGGGAGATCGGCGACTGGTTCGGCGCCGGGCCGGCGGCCCTGGCGCTGGGCGGCGAGTTCCGC AAGGAAGCGTTCCACCAGGACATCCAGGACTTCGCCGGCAACGTGCAGAGCCTCGGCGTCGATCCCGCCGCCACGGTCAGCGGCGAGCGCAACCTGAAGG CGCAGTACGCCGAACTCAACGTGCCAGTGCTGGACAGCCTGGAACTCAGCGCGGCGATCCGCCACGACAAGTACAGCGACTTCGGCAGCACCAGCAATCC GAAATATTCTTTCCGCTTCCAGCCGTTCCGCCAGTTGGTCCTGCGCGGCGCCTACAGCGAAGGTTTCCGTGCGCCGTCGCTGTACGAACTGTACAACCCG ACCTTCACCACCTATACCAGCGCCAACTACGACGACCCGCGCCTGTGCGCCGGCGGCCAGCCGAGCCAGGGCGGCATCGCCAACCGCGACTGCGCCCAGC AGTTCTACAACGCCACCGGCGGCAATACCGACCTGCGACCGGAAACCGCGCGCAACGTTACCCTGGGCCTGGTCTACCAGCCGCTGCGCGACCTTTCCGT CGGCCTGGACTTCTGGTGGATCAGGATCGCCAACCAGATCGCCGAGTTTCCCGAAGCGGCGATCTTCGCCGACCCGCAGGCCTACGCCGGACGCATCGTG CGCAAGGCCGACGGCTCGATCGATCACGTCGTCACCGGACTGGCCAACCTCGGCAAGGTAAAGACCAGCGGCGTCGACCTGAGCCTCGATTATCGTTTCC CGGCCAGCCGCTACGGGCAGTTCGGGCTCGACCTGCAAGGCACCTACGTGTCCCGCTACGACTTCCAGCAGCAGATCGGCGGCCAGTACCTGGACAACGT CGGCGACTTCCAGGGCGTCGGCGTGATCGCCCGCTGGAAGCACGTCGCCAACGCCACCTGGAGCCGCGACGCCTGGCAGGCCACCCTGAGCAACCGCTAC ACCAGCGGCTACAACGACTACGACCGCGCCAGCCACGGCAAGGTCGGTTCGTGGAACCTCTGGGACCTGGCCGGCAGCTACCGCCTCAGCCACGCGCTGG GGCTGACCCTCGGGGTGAAGAACCTGTTCGACCGCGAACCGCCGTTCAGCAACCAGACCTACACCTTCCAGAGCGGCTACGACCCGCGCTACACCGATCC CTACGGGCGCATCCTGTTCGGCCGCCTCAGCTACAGCTTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGCCGGCGCGGGCGCCCGGCCGGTATGGCCGGCAAGTCCGTCGACGGCTGTCCAGCTACCAGATCCGGTAGCCCTGCCAGATTTCGCAGGCGACCAGATC TGGCAGGTTGTTGGGCTCCCGGTGCCATGCAACCTATTACGCCTCTCGCCCCCCACCCGTTCGCGCAAGAGGACACCGCATGATCATTCTCGGGATCACC AACAACGACCTGGCCGGCGCCTGCCTGGTGCGCGACGGCGGGATCGTCGCCGCCGCCAGCGAGGAGCGCTTCACCCGCCAGAAGGACCACAAGGCCTGGC CGAGCCGCTCCATCGACTATGTGCTCGGCGAGGCCGGCATCGACCTGGCCGACATCGACCGCATCGCCTACGGCTGGAACGCCGGGTTCGACGCCGGGCG GCACCTCGACCTCTATCTGGACCGGGTCCTCGAGGAAGCCCGCGAGCGTCCCGAGGGCCTGCCGCACCTGCGCAAGCGGATCGCCGACGAAATGGCCAAC
|
|
| Amino Acid Sequence |
>TonB system transporter
MHRSLHTDAPLGAALLLALQLAPGSAAAAEEQAPVDPPTVQLQRIEVTGSAIRRVDAETAVPISVLRAEELRQQGVTSTEELIGRLSGNQGVYNSSRSVG SATGGASFADLRGIGANKTLVLLNGRRLANNAIDGSAVDLNTIPFAAIDRVEVLRDGASALYGTDAIGGVINFITRKSLNEGRFDSGYASPTHDGGGNQR NVSASWGFGELEEDRFNVFAVANYDKQERLGAKDRGYTYNYQPGRGLDYSSGTAFPGNWSQGANASNPLAAGGCKGADLIPRNGICRQSLWRYLDLVPET EKTSVFSRATGKLADEHNVSLEYFWSRNDNATQVGPGTLTGLQIDPGTAFYPGNGITPGPGGFVLDPSRPVEVNWRQSVLGPRLQSSQNTGQRLLLGFDG QFADWDYDIGASYNQNKVVDHIHSGYVDDRAAALGIANGTLNPFGPQTDAGLAYLGSHALSGDFRTSVGRVKGLDARASREIGDWFGAGPAALALGGEFR KEAFHQDIQDFAGNVQSLGVDPAATVSGERNLKAQYAELNVPVLDSLELSAAIRHDKYSDFGSTSNPKYSFRFQPFRQLVLRGAYSEGFRAPSLYELYNP TFTTYTSANYDDPRLCAGGQPSQGGIANRDCAQQFYNATGGNTDLRPETARNVTLGLVYQPLRDLSVGLDFWWIRIANQIAEFPEAAIFADPQAYAGRIV RKADGSIDHVVTGLANLGKVKTSGVDLSLDYRFPASRYGQFGLDLQGTYVSRYDFQQQIGGQYLDNVGDFQGVGVIARWKHVANATWSRDAWQATLSNRY TSGYNDYDRASHGKVGSWNLWDLAGSYRLSHALGLTLGVKNLFDREPPFSNQTYTFQSGYDPRYTDPYGRILFGRLSYSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|