Pseudomonas aeruginosa PA7, PSPA7_6367 (gidA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CATGAGTTCTCCCTCGATGCGCCCGGCGACTGAGCCGTTCCAGTGATTCCCTTCCCTTTTTCATGCCGTTCGTGCCCTCCGACGGCAGCGCTCGCGCTCG CCTGAAACCTGTGGAAAACCCCCGGTACAGGCCCGTAGATAAAACCGCTCCAGCTCTGTGCATAACCCTCCATGTTGATAACAGGACATTCCATCCACAG CTAAAAAATGCTTATCAACAGGGCTCCGAATGGGTTTGAGACAGCCTTATCATTCTCCATGACGCCCGTCCTTCATGGGCTTTAGAGAGTTATCAACAGA AAAGGGCGAGCTAAGTAATAAACACAAGCTCTAAAAAGATATAAACATTCCTTTCCTTTTATTTTTTGTAAGGCCGGGCACCCGTTTTGCCCACCTCGCG AGAGTTGGCTATTTTTTGTTCAGGAGTCTTCATTCAGGACGGCTAAATCCTTATACTGTCCGGCTTTCCTGAATTCCTGCTTCTGAACAGGCCGAGGTGC
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| DNA Sequence for Gene |
>PSPA7_6367
|gidA
GTGGTGGATTTCCCTACCCGTTTTGACGTAATCGTGATCGGCGGTGGCCATGCGGGCACCGAAGCCGCACTCGCGGCTGCGCGCATGGGTGTGAAAACCC TGCTGCTGACCCACAATGTGGAAACCCTGGGGCAGATGAGCTGCAACCCCGCCATCGGTGGGATCGGCAAGAGCCACCTGGTCAAGGAAATCGATGCCCT CGGCGGGGCCATGGCCGAAGCCACCGACAAGGGCGGTATCCAGTTCCGCATCCTTAACAGCCGCAAGGGGCCGGCAGTGCGCGCCACTCGTGCACAAGCC GATCGCGTGCTCTATAAGGCCGCTATCCGCCATACACTGGAAAACCAGCCGAACCTGTGGATATTCCAGCAGGCCTGCGACGACCTGATCGTCGAGCAGG ACCAGGTACGCGGCGTGGTGACCCAGATGGGCCTGCGTTTTCATGCGGACAACGTGGTACTCACCACCGGCACCTTCCTCGGCGGACTTATCCACATCGG CCTGGAGAATTACTCCGGTGGCCGCGCAGGCGATCCGCCATCGATCGCCCTGGCCCGCCGCCTGCGCGAATTGCCGTTGCGGGTCGGCCGACTGAAGACC GGCACGCCACCACGCATCGACGGGCGTAGCGTGGTCTTCTCGGTGATGACCGAGCAGCCGGGCGACACGCCGATCCCGGTGATGTCTTTCCTCGGTTCGA AGGAACAGCATCCCGAGCAGGTCAGTTGCTGGATCACTCACACCAACGCGCGGACCCACGAGATCATCGCCGCCAATCTCGATCGCTCGCCGATGTACTC CGGCGTGATCGAAGGCATCGGTCCGCGCTATTGCCCTTCGATCGAGGACAAGATCCATCGCTTCGCCGACAAGGAAAGCCACCAGGTCTTCCTCGAGCCC GAAGGCCTGACCACCCACGAGCTGTATCCCAACGGCATCTCGACCTCCCTGCCGTTCGACGTGCAACTGCAGATCGTGCGTTCCATCCGCGGCATGGAGA ATGCCCACATCGTCCGCCCTGGCTATGCGATCGAATACGACTTCTTCGACCCGCGCGACCTGAAGTACAGTCTGGAGACCAAGGTCATCGGCGGGCTGTT CTTCGCCGGCCAGATCAACGGCACCACCGGTTACGAGGAAGCCGGCGCCCAGGGCCTGCTGGCTGGCGCCAACGCCGCATTGCGTGCGCAGGGCAAGGAC AGCTGGTGCCCGCGTCGCGACGAGGCCTACATCGGCGTGCTGGTGGACGACCTGATCACGCTCGGCACCCAGGAGCCGTACCGCATGTTCACGTCGCGGG CGGAGTACCGCCTGATCCTTCGCGAGGACAACGCCGACCTGCGTCTTACCGAAAAGGGGCGCGAACTGGGCCTGGTCGACGACCGGCGCTGGGCTGCCTT CGAAGCCAAGCGCGAAGGCATCGAACGCGAGGAACAGCGGCTGAAGAGCACCTGGGTGCGTCCGAATACCCCGCAGGGCGAGGCCATTGCCGAGCGCTTC GGTACGCCGCTGACCCATGAATACAACCTGCTCAACCTGCTGAGCCGCCCGGAGATCGATTACGCCAGCCTGGTGGAGATCACCGGCGACGCTGTGGATA ACCCGCAGGTGGCCGAGCAGGTGGAGATCCGCACCAAGTACGCCGGCTACATCGACCGCCAACAGGAGGAGATCGCCCGGCTGCGCGCCAGCGAAGACAC TCGCCTGCCTGTGGATATCGATTACCTGGGGATTTCCGGCCTGTCGAAGGAAATCCAGAACAAGCTGAACCAGGCCCGTCCGGAAACCCTCGGCCAGGCT TCGCGGATCCCTGGCGTCACGCCGGCTGCGATTTCGCTGTTGTTGATCCACCTGAAGAAGCGTGCCTCTGGCCGCCAACTGGAGCAGAGCGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGTCTGCGGTAACCCGACACCACGCCGATGAACTCGCGCGTGGTGCTGACGAGCTCGGCGTCGCCCTGGACGCCGAGAAGAAACACCAGTTGCTGGCCTA CCTGGCCTTGCTGATCAAATGGAACAAGGCCTACAACCTGACCGCCGTACGCGACCCGGACGAGATGGTTTCGCGCCACCTGCTCGACAGCCTGAGCATC GTGCCTCACGCCGAGGCCGGGGATAACTGGCTGGACGTCGGCAGCGGCGGGGGCATGCCCGGCGTGCCGCTGGCCATCCTGTTCCCGGAAAGGCGCCTGA CCCTGCTCGACAGCAACGGCAAGAAGACCCGCTTCCTGACCCAGGTGAAGCTCGAGCTGAAGCTGGCCAACCTCGACGTCGTGCACAGCCGGGTGGAAGC CTTCCGTCCCGAGAGCCCCTTCGATGGCATCGTTTCCCGCGCTTTCAGCAGCCTGGAGGACTTCGCCAACTGGACCCGCCACCTCGGTGGCCAGGAAACC
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| Amino Acid Sequence |
>tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
MVDFPTRFDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDALGGAMAEATDKGGIQFRILNSRKGPAVRATRAQA DRVLYKAAIRHTLENQPNLWIFQQACDDLIVEQDQVRGVVTQMGLRFHADNVVLTTGTFLGGLIHIGLENYSGGRAGDPPSIALARRLRELPLRVGRLKT GTPPRIDGRSVVFSVMTEQPGDTPIPVMSFLGSKEQHPEQVSCWITHTNARTHEIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFLEP EGLTTHELYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDFFDPRDLKYSLETKVIGGLFFAGQINGTTGYEEAGAQGLLAGANAALRAQGKD SWCPRRDEAYIGVLVDDLITLGTQEPYRMFTSRAEYRLILREDNADLRLTEKGRELGLVDDRRWAAFEAKREGIEREEQRLKSTWVRPNTPQGEAIAERF GTPLTHEYNLLNLLSRPEIDYASLVEITGDAVDNPQVAEQVEIRTKYAGYIDRQQEEIARLRASEDTRLPVDIDYLGISGLSKEIQNKLNQARPETLGQA SRIPGVTPAAISLLLIHLKKRASGRQLEQSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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