Pseudomonas aeruginosa PA7, PSPA7_6367 (gidA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11806
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0008033 tRNA processing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11806
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0002098 tRNA wobble uridine modification
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00129
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell division Other PA7 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.150.570 - IPR044920 tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain superfamily 568 620 7.6E-24
SMART SM01228 GIDA_assoc_3_2 IPR047001 tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain 545 616 3.5E-42
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 149 167 8.4E-5
NCBIfam TIGR00136 JCVI: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 8 621 0.0
FunFam G3DSA:1.10.10.1800:FF:000001 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG - - 460 549 2.4E-26
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 10 29 8.4E-5
Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 6 623 42.433968
FunFam G3DSA:1.10.150.570:FF:000001 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG - - 568 621 4.4E-23
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 2 222 2.1E-87
Gene3D G3DSA:1.10.10.1800 - - - 460 558 1.3E-26
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 295 459 1.1E-57
FunFam G3DSA:3.50.50.60:FF:000002 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG - - 296 459 1.5E-86
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 8 262 1.4E-51
Pfam PF01134 Glucose inhibited division protein A IPR040131 MnmG, N-terminal domain 9 400 0.0
Pfam PF13932 tRNA modifying enzyme MnmG/GidA C-terminal domain IPR026904 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, C-terminal 403 615 1.6E-77
FunFam G3DSA:3.50.50.60:FF:000010 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG - - 3 234 5.1E-127
PANTHER PTHR11806 GLUCOSE INHIBITED DIVISION PROTEIN A IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related 7 626 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.