Pseudomonas aeruginosa PA7, PSPA7_5242
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTCCAGTACCGCCCGGACTACCTCGACCCCGACGGCGAAGGCGCCCGCTGGCAGTCCTACATCGCCGCGCTGGATACCTTCTTCCTGCGCGGCCAGCAGA AAGGTGTGTTCCGCATCGACATCACCGCGGCAGTCTTCACCGAGCTGTTCCTGACCCTGATCTATGGCCTGGTCGACGCCGAACGGCGCGGGCGCGCGGC CAGCGCCAACTCCGCGCAAACCCTCGAACAGATGTTCCTCCACGGCGCCGCCAATCCGGCGCGTCCCTGAGGTTGCACCGCCCTGCCCGGAATCCCCCGC GGCCATGTCCGGCCAGATTTTCCGGGCACCGCCGCCAGACAGCCCCGGCGAACCGGAAAGCCCCGCCATTCCTCGCTGCGACAAAGTGACCCGTTAGGCC GGAAAGGACCACGACGCTCGTCGGCGATACTGGCACTTGGCCTTGCTTCCGGGCATCCTAACTGCCTACTGAATCACAGCTGCCCCAGGAACTCCGGTCA
|
|
| DNA Sequence for Gene |
>PSPA7_5242
GTGTCGACCCCCTCGCAAACCCCGTCGCCGCCTCCCGCCGGCGACCCGCTGACCGTTCCCGTCCGCCAGGCAGCCAAGGGCGGTCTGCTGTTGCTGGTCG TGCTGATGCTCGGCTTGCTGCTCTGGCAGATATGCCAGGAATTGCGCCAGCAGGAGCGCTTCGAACACGAACGGGCCGCCGCCCAGCTCGACCGCCTGCA CGACCGCCTGTCCCTGACCCTCGAACTGAAGGCCCGCACCGCCCTCGCGTTGCTGCCAGGAGCGCCGCCCGCCGAGCGCGACGAGATCCGCCGCAGGCTG TTGCCCCGGGTCAGCGATGCGCTGCCGCAGGTGCGGGCGCTGGAGTGGGTGGATGGCAAGCCGCAAGCGGGCAATCCGCCACTCTATGACCGGCTGCGCC AGCACGCCGGTGCCGGTCTCTATCACTATTGCCTCGATCCGCGCGATGGTGAATCTCTCTATCTCACTCTGCGCGAACCCGGCAGCCGCCGCGACAGCGG CTTCTGGCTGCTGCGCCTGGCCAGCGACAGCCTCGCCCAGTGGAGTCCCGACCTGCCGGCCGGCAACCTGCTCTGGCGCCTGGAAGACCAGTACGCCGGC CGGGTGCTCTGGCATGCGCCGGGCAACGCGACGTTGCTCGACGACATGCAGAGCCTCGGCGTGGAGCCCCTGCGCAACAGCGACTGGCAATTGCGCGGGC TCCACGACAGCCCCCAGGTGCGGCTCGGCCTGCTGCGGGGGATCGGCGGCGAACTGCTGATATTCCTCCTGCTGGTCGGCGTCACGGTGCTCACCCTGCT GCGCCTGCATCGCGAACAGCAAGGCCTGCGCGCCATGACCCTGGCCTCGCAACGCAGCCTGCGCCAGGCGGCCACGGCACTGGCGGCGATCGACGAGCGG GTGCTGGTGACCCGCGCCGATGGCCGTCTCAGCTATCTCAACCCGCAGGCCGAGCAACTCTTCGGCATCAGCTCGGCGCAGGCGCGCCAGCATCATTTGC TGGGCCTGCTGCCAGACCTCGAGCCGGGCTGGCTGAGCGACGCCGCCGGCGATGGCGAAACCCGCAGCGAATTGCTGCCGCTGCGGGTGCGCGGCGAACC ACGGGTGTTCACCCTCAGCCGCCACCCGTTGGCCAGCCATACGGAGGCCGCCCAGGCCTGGACCCTGCGCGAACGGATCCTCCAGGGCGGCCAGGTCTGG GTGCTGCGCGATGTCACCGAGGAGCAGCACGCCCTCGGCGTCCTGGAAGAGACCCGGCGGCGCTACCAGGACATCTTCGAGGGCGTCGGCGTGGCGCTCT GCGTGCTGGACCTGTCCGCCCTGCGCCAGGCCCTGGCCGAGTACCGGCTGGAGACTCCCGCCGCGCTGCATGCCTGGCTCGCCGGGCGGCCCGCCCGGCA GCGCGAGCTGCTGGAGCGGATCCGCATCACCGAGATCAACGACCTTACCCGCCGCCTGCTGGGAATCGACTCCACCGGCCAGGCCTGGCAGCGCCTTCTC GACCACGGACCGCTGCAACCGGACAGCCTGCGCCTGCAGGTGATCGAGGCCCTGATCGAGCGCCGCCCGCTGCTCGAACTCGAAGCCACGCTGCGCAACG ACCGCGGCGCGCCGCGCCACCTGTGGCTGCAGCTGCGCCTGCCGGACAACCCCGGCGAATGGCACGCGGTGACCCTCAGCCTGTCCGACGTCACCAGCCG CAAGGAAGTCGAGCTGTCGCTGATCGAGCGCGAGAAATTCTGGTCGGACGCCGTGCAGGCGGTGCCCGACACCCTGTACATCCATGACCTGAACGCGCGC CGGGTGATCTTCAGCAACCACCACCTGGGCCAGCAGCTTGGCTACGACCAGGAAGAACTGGCACGGATGGGCGAGAACTTCTGGGAAACCCTGCTGCACC CCGACGACCAGGAATACTACTGGCGCATCCGCAACCTGCAGCACGTGGTCGGCGACGGCCTGCTGCTCGACAGCCAGTTGCGCTGGCGCCACCGCGATGG CCGCTGGCACTGGTTCGACATCCGCGAACAGGCCTTCAGCCGGGACCGCAGCGGCCGCGTGGCGCGCCTGATCGGGGTGGCCAAGGACATCACCTTCACC GTCGAGGCGAACAACGCGCTGCGCGAGAACGGTCGGCGCTACCGCATGCTGGCGGAGAACATCAGCGACGTGATCTTCTCCACCGACGCCGAGCTCAACG CCAACTACGTCAGCCCCTCGGTGCAGCACGTGTTCGGCTACAGCCCGGAGTGGGCGCTGCTCAACGGTCTCCACCAGACGGCCACCAATCCGCGCCAGCT GGGTCGCCTGAACGGCCTGTTGCGTCGCGTGCGGCATGCCATCGGCGACCGCGAGAAACTCGCCGAGCTGCGCGAGAATCCCGCCCAGCACCTGTTCGCC CTCGACTGCCTGCGCGCCGATGGGCGCAAGATCCCCATCGAACTGCGACTGGTCCTGATGTGGGACGAACACGATCGCTTCGAGGGCCTGCTCGGCGTCG CCCGCGACATCAGCCAGCAACGCCGCGCCGAACGCGAATTGCGGATGGCGGCGACGGTATTCGAACACTCGACCGCGGCGATCATGGTCACCGACCCGGC CGGCTATATCGTCCAGGTCAACGACTCCTTCTCGCGCCTGACCGGCTACAGCCCGGCCGACGTGCTCGACCAGCAGCCACGCCTGCTCACCGCCGACCGC CAGGAAGCCAACCAGCTCAAGCACGTGCTCGCCAGCCTGCAGCACAGCGGCAGTTGGGAAGGCGAGATCCTGCAGAAGCGCAAGACCGGCGAACTCTATC CCTCCTGGGTCGGGATCACCGCGATCCGCGACGAGGAAGGCGACCTGGTCAGCTTCGTCTGTTTCTTCAGCGACATCAGCGAACGCAAGGCCAGCGAGCG ACGCATCCACCGCCTGGCCTACTACGACGCCCTCACCCACCTGCCCAATCGCACGCTGTTCCAGGACCGCCTGCACACCGCCCTGCAACAGGCCGAGCGC AACGGCCAGTGGGTGGTGCTGATGTTCCTCGACCTCGACCGCTTCAAGCCGATCAACGACTCCCTCGGCCATGCCGCCGGCGACCGCATGCTGCAGGAAG TGGCGACCCGCCTGAGCGCCTGCGTCAGCCAGGACGACACGGTGGCGCGCATGGGCGGCGACGAGTTCACCCTGCTGCTGCCGTCCCAGGGCGACCGCGA GATCGCCCTGAAGCGGGCGATCCAGGTCGCCGAGCTGATCCTCGGCCGCCTGGCCCGACCGTTCACCCTGGAAGGCCGCGAGTTCTTCGTCACCGCCAGC ATCGGCGTGGCCCTGTCGCCACAGGACGGCGCCGAGCTGAGCCTGCTGATGAAGAACGCCGACACGGCGATGTACCACGCCAAGGAGATGGGCAAGAACA ACTTCCAGTTCTACCAGGCCGAGATGAACGCCCGCGCCCTCGAGCGCCTGGAACTGGAAAGCGACCTGCGCCGCGCCCTCGAACTGGGCGAGTTCGTCCT CCACTACCAGCCGCAGTTCACCGGCGACGGGCGTCGCCTGACCGGCGCCGAGGCCCTGTTGCGCTGGCAGCACCCGCGCCGCGGGCTGGTTCCGCCGAGC GAGTTCATTCCGGTACTGGAGGAGATCGGCCTGGTGGCCCAAGTCGGCGACTGGCTGCTGGCGGAAGCCTGCAAGCAGTTGCGTAGCTGGCACAAGGCCA AGGTACGGGTGCCGAAGGTCTCGGTGAACCTCTCGGCACGCCAGTTCGCCGATGGCCAACTGGGCGAGCGGATCGCCGCGATCCTCTACGAGACCGGCAT CCCGCCGGCCTGCCTGGAACTGGAACTGACCGAAAGCATCCTGATGAGCGACGTCGCCGAGGCCATGCAGATCCTCTCCGGGCTCAAGCGCCTCGGCCTG GCCATCGCGGTGGACGACTTCGGCACCGGCTACTCCTCGCTGAACTACCTCAAGCAGTTCCCCATCGACGTGCTCAAGATCGACCGCAGCTTCGTCGACG GCCTGCCCCATGGCGAGCAGGACGCGCAGATCGCCCGGGCGATCATCGCCATGGCCCACAGCCTGAACCTGATGGTGATCGCCGAGGGCGTGGAAAGCCA GGCGCAGCTGGACTTCCTCCGCGAGCACGGCTGCGACGAGGTGCAGGGCTACCTGTTCGGCCGGCCGATGCCCGCCGAGCAGTTCGGCATGCTCTACGCC AGCGACGTACTGTTCATGTTCAACGAGGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGCCGGGCGGCGCGCTTGAGCGCCGCTTGTCCGCGACATGATGGCCTTTCATGTGCCAGCTCCCGCCGCATGGGTTAGAATGCGCGCCTTTTCCCAGCA CCGATCCTTATGAGGACCGCCATGTTCAGCCGTGATTTGACCCTCGCCCGCTACGATGCCGAACTCTTTGCCGCGATGGAGCAGGAAGCCCAGCGCCAGG AAGAGCACATCGAGCTGATCGCCTCCGAGAACTACACCAGCCCGGCGGTGATGGAAGCCCAGGGTTCGGTGCTGACCAACAAGTACGCCGAAGGCTACCC GCACAAGCGCTACTACGGTGGCTGCGAGTACGTCGACATCGTCGAGCAACTGGCCATCGACCGCGCCAAGCAACTGTTCGGCGCCGACTACGCCAACGTC CAGCCGCATGCCGGCTCCCAGGCCAACGCGGCGGTCTACCTGGCCCTGCTGTCGGCCGGCGACACCATCCTCGGCATGAGCCTGGCCCACGGCGGCCACC
|
|
| Amino Acid Sequence |
>motility regulator
MSTPSQTPSPPPAGDPLTVPVRQAAKGGLLLLVVLMLGLLLWQICQELRQQERFEHERAAAQLDRLHDRLSLTLELKARTALALLPGAPPAERDEIRRRL LPRVSDALPQVRALEWVDGKPQAGNPPLYDRLRQHAGAGLYHYCLDPRDGESLYLTLREPGSRRDSGFWLLRLASDSLAQWSPDLPAGNLLWRLEDQYAG RVLWHAPGNATLLDDMQSLGVEPLRNSDWQLRGLHDSPQVRLGLLRGIGGELLIFLLLVGVTVLTLLRLHREQQGLRAMTLASQRSLRQAATALAAIDER VLVTRADGRLSYLNPQAEQLFGISSAQARQHHLLGLLPDLEPGWLSDAAGDGETRSELLPLRVRGEPRVFTLSRHPLASHTEAAQAWTLRERILQGGQVW VLRDVTEEQHALGVLEETRRRYQDIFEGVGVALCVLDLSALRQALAEYRLETPAALHAWLAGRPARQRELLERIRITEINDLTRRLLGIDSTGQAWQRLL DHGPLQPDSLRLQVIEALIERRPLLELEATLRNDRGAPRHLWLQLRLPDNPGEWHAVTLSLSDVTSRKEVELSLIEREKFWSDAVQAVPDTLYIHDLNAR RVIFSNHHLGQQLGYDQEELARMGENFWETLLHPDDQEYYWRIRNLQHVVGDGLLLDSQLRWRHRDGRWHWFDIREQAFSRDRSGRVARLIGVAKDITFT VEANNALRENGRRYRMLAENISDVIFSTDAELNANYVSPSVQHVFGYSPEWALLNGLHQTATNPRQLGRLNGLLRRVRHAIGDREKLAELRENPAQHLFA LDCLRADGRKIPIELRLVLMWDEHDRFEGLLGVARDISQQRRAERELRMAATVFEHSTAAIMVTDPAGYIVQVNDSFSRLTGYSPADVLDQQPRLLTADR QEANQLKHVLASLQHSGSWEGEILQKRKTGELYPSWVGITAIRDEEGDLVSFVCFFSDISERKASERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAER NGQWVVLMFLDLDRFKPINDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLARPFTLEGREFFVTAS IGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPS EFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGL AIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQFGMLYA SDVLFMFNEA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|