Pseudomonas aeruginosa PA7, PSPA7_5115
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACTCGATCAACGGCAACAACGTCTCCAAATGGTGCGACGCCGGCTACGACAAGCTGGTCAAGGAAGCCAAGCGGGTCACCGACCAGGACAAGCGCAGCGA GCTGTACAAGCAGGCCCAGCACATCCTCAAGGAGCAGGTGCCGATCACCCCGATCGCCCACTCCACCGTCTACCAGCCGATGAGCAAGTCGGTCCACGGC TTCAAGATCAGTCCCTTCTCGCGGAACGCCTTCTATGGCGTAGCCAACCAGCCCTGATGCCGACGCCGCCCCGGTCGTGAAACGACCGGGGCGCAGAAGA ACGGCACGACTTCGTACTTCATTTTTTTGCTTTTCCTGCCCGTGTTCCAGAACGGCGCTACGCGCGTTCCGCCAGGAACGCTCGCCGCGCCGTCTTCGAC CGCCGCGCCCCGGCGCAGGCGAAACCGGCGCAAACCTGGTGGTGAAACAGGTGCCAACGACAACAATAAAGGGAGCAATCAGGTGATGAGAAACCAACGT
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| DNA Sequence for Gene |
>PSPA7_5115
GTGACCAGCGCTACGCTGGGGCTGGCCTTGCTGGCTGCGAGCGCGCCGGGCTGGGCGGCCGACGAGCAGGAAAACCCGCCGGCCCCGGACAACCCGAGCT ACGCCGCCGAAGTGCAGAGCATTCCCAGCGTGGCGAAGCCGATCAAGGGCCAGGCCGGCGCCACCGGGCTGGTCGAAGGCCAGAGCCTGACCCTGACCAC CCGCAACTTCTACTCGCGGGAAAACATGAAGGACAGCTTCACCTTCCGCATTCCCAAGGCCGGCGGCGGCTCCCAGCGCATCCACCAGCGCAACGCCTGG GTCCAGGGCACCGTTCTCAAGTACAGCTCGGGCTACACCCAGGGCACCGTCGGTTTCGGTTTCGACGTCGCGGCATTCAACGAGATCGCCCTGGAGCGCG GCAAGGGCCGCATCGGCGGCGGCGGCAACCGGACCCTGGCGAACAGCGACGGCGAGGCGCTCGGCGAGTGGTCCAAGCTGGGCGTCGCCAACATCCGCCT GCGCGCCTCCAACACCGAATTCAAGGCCGGTCGCTTCCTGGTCAACACTCCGGTGTTCAGCTACATCGACAACCGCGCCCTGCCCTCCAGCTTCACCGGC TTCGCCGTGACCAGCGAGGAGCTGGACAACCTCAGCCTGCAGGCCGGCAGCTTCCGCAAGGTCAGCCCGCGGACCGGCTCCGGCGACGAGGACATGACCA CCGAGTACGGCACCCGCCAGGTCAAGGGCGACCGCCTGAACTACCTCGGCGGCAACTACAAGCCGCTCGACGGACTGGAGATATCGCTCTACGGCTCGCA CTTCCAGGACGTCTGGAACCAGTACTACCTCGGGGTCACCCACGACATCGGCGACCTGGAGAACGGCATCGCCCTGCGCACCGCCTTCAACGGCTACCAC ACCGGCGACACCGGCGCGCGCGAAGCCGGCTACATCGACAACGACACCTGGAGCCTGGCCTTCACCCTCGGCCATCGCGCCCACGCCCTGACCCTGGCCT ACCAGCAGGTCGATGGCAACGAATACTTCGACTACGTGCACGAGACCTCGGCGATCTTCCTCGCCAACTCGATACTCGCCGACTACAACAGCCCCAACGA GAAATCCGCGCAGATCCGCTACGAGACCGACTGGAGCTACTACGGCGTACCCGGCCTGAGCACCGGGGTGTGGTACGTGAAGGGCTGGGACATCGACGGC ACCCACTACGACGGCGACCGCAACGGCGCCTACGGCAACTATGCCGAGGTGCGCGCCCAGGACGGCGAGAAACACCACGAACTGGGCCTGATGGCGGCCT ACAAGGTGCAGAACGGCCCGATCAAGGACAGCACCTTCAAGCTCACCTACATGATGCACAAGGCCAGCCAGAACCAGATCGACGGCAGCGTCAACGAACT GCGCCTGGTCAGCACCTTCCCCTTCAACCTGCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCTGCGACAACCGGCGGCCCCGGCGACGGGGCCCACGAGGAGGACTCCATGCTCCATCCGTTGCTCCGACACCTGCCCCTGGCCCTGGCGCTATGCGCC GCCGGGACGGCCCAGGCGAAGAACCTGGTGGTCTGCACCGAGGCCAGCCCGGAAGGCTTCGACATCGTCCAGTACACCGGCGCGGTCACCGCCGACGCTT CCGCGGAAACCGTGTTCAGCCGCCTGCTCGCCTTCCGCCCCGGGACCACCGAAGTGATCCCCGGGCTGGCCGAGCGCTGGGACGTCAGCGCCGACGGACT GAGCTATACCTTCCACCTGCGCCCCGGCGTGAAATTCCATACCACCGACTACTTCAAGCCGACCCGGAGCCTGAACGCCGATGATGTGCTGTGGAGCTTC CAGCGCGCCCTCGATCCGAAGCATCCCTGGCATGCCTCGGCGCCGCGCGGCTACGCCTACTTCGAGGCGATGGGCATGGGCGAGCTGATCAGGTCGGTGG
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| Amino Acid Sequence |
>putative porin
MTSATLGLALLAASAPGWAADEQENPPAPDNPSYAAEVQSIPSVAKPIKGQAGATGLVEGQSLTLTTRNFYSRENMKDSFTFRIPKAGGGSQRIHQRNAW VQGTVLKYSSGYTQGTVGFGFDVAAFNEIALERGKGRIGGGGNRTLANSDGEALGEWSKLGVANIRLRASNTEFKAGRFLVNTPVFSYIDNRALPSSFTG FAVTSEELDNLSLQAGSFRKVSPRTGSGDEDMTTEYGTRQVKGDRLNYLGGNYKPLDGLEISLYGSHFQDVWNQYYLGVTHDIGDLENGIALRTAFNGYH TGDTGAREAGYIDNDTWSLAFTLGHRAHALTLAYQQVDGNEYFDYVHETSAIFLANSILADYNSPNEKSAQIRYETDWSYYGVPGLSTGVWYVKGWDIDG THYDGDRNGAYGNYAEVRAQDGEKHHELGLMAAYKVQNGPIKDSTFKLTYMMHKASQNQIDGSVNELRLVSTFPFNLL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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