Pseudomonas fluorescens AU6308, MZ32_RS00040

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU6308 Scaffold_100, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAGCAGGAGCAGCTCAAGGTCGTCAATTTGTTCTTCAACAAGCAAATGACCTACGTGGAAGACATCGATCTCTGGCACGTTGTGGATTACTGGGAGACGC CCGTCGAGGCACTCTGGAAAGGTGCTGGTGACTGTGAAGACTACGCCATCGCAAAATATTTCAGTTTGCGTCACCTGGGCGTGTCCAGCGACAAATTGCG CATTACCTACGTCAAGGCCCTGCGGCAGAATCGGGCGCACATGGTCCTGACTTATTATTCGAGCCCCGACGCCGTCCCACTGGTGCTCGACAGCCTGATG GATGAGATCCTGCCGGCTACCCGTCGCACCGACCTGGTCCCGGTGTACTCATTCAACGCCGAGGGGTTGTACTTGCCTGGTGCCAAAGGCAACAAAAAAG TCGGTGATACCAAACGCTTGTCGCGCTGGCAGGATGTGTTGAGAAAAATGCGTGCGGAAGGCTTCCCAGCCGAGCCTGCCAACTAGGAGTAACTGATCGG
DNA Sequence for Gene
>MZ32_RS00040
ATGTCTCTGTTCAAACAGCTATTGATCGCAATCTGTCTGTTCCTGGTGGTCGCCTTCAGCGGCAGCTTCATGGTCAGCCTGGAAAGCTCGCGCACCCAAT ACGTCAACCAATTGCGCTCCCACGCCCAGGATGCCGCGACGGCATTGGCGCTGTCGCTCACCCCGAATATCGATGACCCAGCCATGGTGGAGCTGTTGGT CAGCTCGATCTTCGACAGCGGTTACTATGCCAGCATCCGCGTCGTGGACCTGGCCACCGACAAAACCATCGTCGAGCGCAGCGGTATTCCCGACAACAAC GGCGTGCCCAACTGGTTCGTCAAGCTGATCGGACTGGAGCCGGCGGGCGGTGATGCCCTGGTCAGCCGTGGCTGGGAACAGGCCGCACGGGTAGAAGTGG TCAGCCATCCGATGTTCGCCCTGGCCAAGCTCTGGCAAAGCGCCCTGGGTAGCCTGGGCTGGTTGCTCTTGTGCGGTGCGGTCAGCGTGGTGCTCGGTGG GCTGTTGCTGCGCCGGCAATTGAAGCCGTTGGACTATATGGTCAAACAGTCCCACGCCATTGCCCGCCGTGAGTTCCTCAGCCTGCCTGACTTGCCCCGC ACGCCTGAACTGCGGCGGGTGGTGCAGGCCATGAATCAGATGGTGGAAAAGCTCAAGGCGCTGTTCCAGGAGCAGGCCGAGCGTAGCGAAAAACTGCGCA CCGAATCCTATCAGGACAACCTCACCGGCCTCGCCAACCGCCGTTATTTCGAGATGCAGCTCAACGCCCGCGTCAGTAACCCGGAAGAGACCAACTCCGG CTACCTTCTGCTGCTGCGGGTCAAGGACCTGGCCGGCCTCAACCAGCGCCTGGGTGGCCAGCGCACCGACCAGTTACTGCAAGCGGTTGGCGAACAACTA CTGCGCCAGTGCGCGCCGTACCCGGAAACCCATAACCTCGTCACCCGTATTCGTGGCGGTGAGTTCGCCGTGCTGGCGCCGGGGTTGATGCGTGAAGAAG CGATGCAGCTGGCGCAAAACCTGGAAAGCACTTTGCTCAGCCTGCAAGCGACCGGCGCCAGTGACGTTACGCCGGTCGCCTATATCGGCCTGGCGCCGTT CAGCCATGGCGACGCGCCCCAAGCCCTGCTGACCCTGGCCGACCAGGCCCTGGCCCAGGCCCAAGCGCAGGGCGACACCAGTTGGGTGTGCCTGGACCGC AGCGCCGCCGCCAGCGTGGGAGACGATCACCATGCCTGGCACACCTTGTTGGACCAGGCCCTGACCCAGCAGCGCTTCCAGCTGTACTTCCAGCCGGTTG TCGCCAGCCAGGACCCACAATTGGTCTTGCATTACAAAGTACTGTCGCGCTTGCAGGACGAAGACGGCCACACCATACCGGCCGGGCGCTTCCTGCCGTG GCTTGAGCGCTTTGGTTGGTCCGCCCGCCTGGACCGCCTGATGCTGGAGCAGGTGCTCAAGCAGATGGCCAGCCACACCGAGAACCTGGCGCTGAATCTT TCGGCCGCAACCTTGCAAGATACCCAGGCCCTGAACCGCGTTTATGACCTGCTACGCCAGCACAGCAACCTGGGCCCGCGCCTCACCCTGGAGATTGGTG AGGAGCAACTGCCTGAGCAGCCCGTGCTGGAACAGATGACCCAGCGCCTGCGCGAACTGGGCTTCTCCCTCAGCCTGCAACGTTTCGGTGGGCGGTTCAG CATCATCGGCAACCTGGCGCGCCTGGGCTTGGCGTACCTGAAGATCGACGGCAGCTACATTCGCGCCATCGACCAGGAAAGCGACAAGCGCTTGTTTATC GAGGCCATCCAGCGAGCGGCCCATAGCATCGACCTGCCGTTGATTGCCGAACGTGTAGAGACCGAGGGCGAACTGAAGGTGATTCGTGAGATGGGGATTT TCGGCGTGCAGGGCCAACTGTTTGGCGAGCCCGCCCCCTGGAAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCACCTGTAGGAGCGAGCTTGCTCGCGAAGATCGTCAACGATAACGCGCAAAGCCTGACCCCCCGTGGCGATTTCAGTTTTTTCGCGAGCAAGCTCGCT CCTACAGCGGTAGGAGCGGTTGGATTAAATCAATCCTTTCTCGTCATCATCGATCAACTGGCTCAACCCACCCAACGCTTCCCTCGCCTGGTTACGGTCC ATCAACTTGGCCTGGGCTGCCGGCGGCAGGTCGGTCACACTGATCACCCCCTTGCGGGTCAGCACCTGGATCAAGTCATCCAGCACCCGAATCATCTCCA AGTCGCTCTGCTTGAGCTGGGCCAGGCTGGTTTCCACCACTTCGTTGGCGTACCAGGCCTGTATCTCATGATGATCGGCCGGCAGGGTTTCAGTGGATTC GGTAAAGGCAGCAGCCTCTACGCGAACCAGCGCGCCCTGTGCATCACGTTGCACGTAAAACATAACAACCCCTCGAAAATGCGCCACAGGCGTTCAACAG
Amino Acid Sequence
>DeoR faimly transcriptional regulator
MSLFKQLLIAICLFLVVAFSGSFMVSLESSRTQYVNQLRSHAQDAATALALSLTPNIDDPAMVELLVSSIFDSGYYASIRVVDLATDKTIVERSGIPDNN GVPNWFVKLIGLEPAGGDALVSRGWEQAARVEVVSHPMFALAKLWQSALGSLGWLLLCGAVSVVLGGLLLRRQLKPLDYMVKQSHAIARREFLSLPDLPR TPELRRVVQAMNQMVEKLKALFQEQAERSEKLRTESYQDNLTGLANRRYFEMQLNARVSNPEETNSGYLLLLRVKDLAGLNQRLGGQRTDQLLQAVGEQL LRQCAPYPETHNLVTRIRGGEFAVLAPGLMREEAMQLAQNLESTLLSLQATGASDVTPVAYIGLAPFSHGDAPQALLTLADQALAQAQAQGDTSWVCLDR SAAASVGDDHHAWHTLLDQALTQQRFQLYFQPVVASQDPQLVLHYKVLSRLQDEDGHTIPAGRFLPWLERFGWSARLDRLMLEQVLKQMASHTENLALNL SAATLQDTQALNRVYDLLRQHSNLGPRLTLEIGEEQLPEQPVLEQMTQRLRELGFSLSLQRFGGRFSIIGNLARLGLAYLKIDGSYIRAIDQESDKRLFI EAIQRAAHSIDLPLIAERVETEGELKVIREMGIFGVQGQLFGEPAPWK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site