Pseudomonas fluorescens C2, NL64_RS07635
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain C2 contig_8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGGTCGCCGACGAAGTGCAACGGCTGGCCGAGCGTTCGTCCGCCGCCACCCGGCAAATCGAAACCCTGGTGCGTGCGATTCAAACCGACACCAACGAA GCGGTTATTTCCATGGAACAGACCACCACCGAAGTGGTGCGCGGCGCGCGTCTGGCGCAGGATGCCGGTGTGGCCCTGGAAGAAATCGAAGGGGTTTCCA AAACCCTCGCGGCGCTGATCCAGAGTATTTCCAACGCCGCCCAGCAACAGACGTCGTCTGCCGGGCAGATTTCCCTGACGATGAACGTGATCCAGCAGAT CACCTCGCAGACTTCGTCCGGCTCCACTGCCACCGCCGAGAGCATCGGCAACCTGGCGAAAATGGCCAGCCAGCTGCGGCGCTCGGTGTCCGGTTTCACC TTGCCGGCCGCCAAGGCGCAAGTGGCGGACGAAGCTTGAACCGCCCTCGGGCCTTGGCGTCTTGATTGGCATTTTGACTGAAGCGGGAACTGGAGTGGTT
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| DNA Sequence for Gene |
>NL64_RS07635
ATGGGTGATCGGCACGACTATGTGGCCCTTGAATGGGTCAAAGGCGAGATTGCCGAAACGCTGAAGCAGGCTCATCACGCGATCGAAACCCAGCTTGATG ACCCGCAGGCGACGCACGCCCTGAGCGAATGCCTGGCGTGCATCCATCAGGTTCACGGCAGTTTGCAGATGGTCGAATTCTACGGCGCGGCCCTGCTCGC CGAAGAGATGGAACGGTTGACCACCGCCCTGCAACAGAACCGCGTCAGCCATCGTGACGAGGCGCTGCACCTGATGCTGCAAGCGCTCGGCCAGCTGCCG ATCTACCTCGACAGGGTGCAGAGCGCCCGCCGCGATTTGCCGCTGGTGGTGCTGCCGCTGATCAACGATTTGCGCAGTGCTCGTGGTGAAAGTCTGTTGT CGGAAACCAGCCTGTTCAGCCCGCAACTGCCCGACCTGCCAGCGCTGGATGAAGAAGCGCTGAAGCGGCTGGAACCGGCAGACCTGCCGAGTGTGCTGCG CAAGTTGCGGCAGATGTTGCAGATGGCTCTGGTCGGTTTGCTGCGCGAGCAGGATGACGACACGCATCTCGGTTATCTGGCGACCGTGTTCAGCCGACTC GAAAGCCTGTGCGGCAGCGCGCCCCTGAGCCCGCTGTGGCAGGTCGCTTCGGCGCTGGTCGAGGGCATGCGCGGCGGTGCTATCGCCAACAGTCCGGCCT TGCGCAGCCTGTTCAAGGACGCCGACAAAGAACTCAAGCGCCTGCTCGAACAGGGCATGCGCGCAATCAATCAACCGGCACCGCCGGAGTTGCTCAAAAG CTTGCTGTTCTACATAGCCAAAGCCGAACACCCCACCGGGCAGATGCTGACCATGAAAGATCGCTACGGACTGGACGAGGCGCTGCCGGACAGCGCGATG GTCGATGAAGAACGCGCACGGCTGGCCGGTCCTGACCGCGACGCCATGCGCTCGGTATTGGCGGCGCTCTGCGAAGAGCTGGTGCGGGTCAAGGAGCGCC TTGACCTGTTCGTACGCAGTGACCGGCAACACACCTCCGATCTCGAGAGCCTGTTGGCACCGCTGCGGCAAATCGCCGACACCCTGGCGGTGCTGGGCTT CGGCCAGCCGCGCAAAGTCATCATCGATCAACTGGCGGTGGTGCTGAGCCTCGCCCAGGGCCAGCGTGCGCCCGATGATGCGATTCTCATGGACGTCGCC GGGGCCTTGCTTTACGTCGAGGCGACACTGGCCGGAATGGTCGGCACCGTAGAACCCGAAAGCCAGGAAGAAAGCCGCCTGCCGACCACCGACCTGACGC AGATCCATCAGATCGTGATCAAGGAAGCACGCATCTGCCTGCAACAGGCCAAGGACATGATCGTCGACTACATCGACGCCGATTGGGACCGCCAGCATTT GCAGGCGTTGCCGGCCTTGTTGACCCAAGTGCGCGGTGCGCTGGCGATGATTCCGCTGAGCCGCGCGGCGGGCCTGATCGAAACCTGCAACCACTTCATC CGCGAGCATCTGCTGCTTGATCCGGGGCAGCCCGGTTGGCAGGAACTGGACAGCCTGGCCGACGTGATCGCCAGCCTCGAATACTACCTTGAGCGCCTCA ACGATGACCCGGAAGCGCCGGGTGAGCAGTTGCTCGATATCGCCGAACAAAGCCTGGCGTCCCTCGGTTTCTTCCCCTCTGAACAGCATGTGCCGGTGCT TGAGGACGTGTTGAGCCCCAGCGAAGCACAGGTCATGCAACAAATGCAGGAGCTGGATGGTCCGGCCATCGTGCAGACCCTGGCCGATGTGCTCGCCAGT CCGGTTTCCGCCCTGAACCCTCCGGCCCTGACCACACCGGGCAGCCTGTTGCCGCCGCCTGCCGGTGAAGAGCCGGTGGATGAAGAATTGCGCGAAGTGT TCCTCGAAGAGACTGACGAGGTCCTTGAGATTCTTCGCGAATACTTGCCGCGTTGGTCGGCCAATCCTGAAAACACCTCAGCCCTGAGTGAGGTGCGCCG TGCCTTCCACACCCTCAAGGGCAGTGGCCGGATGGTCCGTGCGCTGGTGTTGGGCGAACTGGCCTGGGCCATGGAAAACCTGCTTAATCGGGTGCTGGAA CACAGCGTCGCGCCGGGCGCTGCGGTGCAGCAACTCCTGGGCGAGGTCGTGGAGCTGCTGCCGGAGCTGGTGGCTGAATATGCCGCCGACGCCCAGCGCC AGCGCAACGACGTCGACCAATTGGCCGCCCACGCCCATGCCCTGGCCAAGGGCGAGGAGTTGGCTGCCGATGAAGACACCCAGGACGTCTCGGCCCTCGA TCCGCTGTTGCTGGAGATCTTCCGCAAAGAAGCCGAAACCCACTTGGCCAGTCTCAATCGCTTTCTCGATCAGGCCGCCGAGCACGTGCCGTTGCAGGCC AGCGACGAATTACAGCGCGCCTTGCACACCCTCAAGGGCAGCGCATCGATGGCCGGAGTTTTGCCGATTGCCGAGCTGGCCGCGCCGCTCGATCAACTGG CCCGGGAATACAAGGCCCACCAAATCGCCCTCGACCTTGATGAAGTCGAAGTGCTGCTGGAAGCCGAAGGCTTGTTCCGGCTCGGCTTGCGCCAGCTCAA GAGCGATCCGTTGGCCGAGATTCCAGACGCTGCATCGTTGATTGAGCGCACCCAGGCCTTGCTTGTCGAACGCCTGGCCAGCCTGTCGAACACACCGAGC AGCGGGCTACGGATCAAGCGCGATCCGCAGTTGATCAACAACTTTCTGGCCCAGGGCATGGACATCCTGCTCGACGCCGAAAGCCTGCTGCAGCGCTGGC AACAGCACCCCGGCGAGCGCCAGGAACTCAGCGCGTTGCTGGACGAATTGACCACTCTTGGCGAAGGCGCGCACCTGGCCGATTTGCATCCGGTGGATGA ACTCTGCGAAGCCTTGCTTGACCTGTACGGCGCCGTGGAGGAAAGCAGCCTGGCGGTTAGCGAAGCGTTTTTCCATGAGGCGCAAAGTGCCCACGAAGCG CTGATCAACATGCTCGACGAGCTGGCTGCCGGCCAGGAAGTCAGCCCGCAGCCGGAGCGGATTCGCGCCTTGCACGGTTTGCTCGACCAGAGCCTCGACC CGTCGGCGATGGGGCTGATTCGCAGCGACGGCAGCCGTTCGCTGAGCATTCGCGACCTGTCCGATGCCACCGCCGAATTGGCACAAACCGCTGTGGAAAA ACCGGCACAGACCACTGTGGGAGCTGGCTTGCCAGCGATGGATTCACAGGCGCCACGTTTATCCAATGAAAACGCGTCATCGTTAACGCCCATCGCTGGC AAGCCAGCTCCCACAATAGAACTGGACGACGAGATCGTTTCGATCTTCCTCGAAGAAGCGGTGGATATCCTCGAAAGCGCCAACCAGGCCTTGCAGCGCT GGTTGAGCGAGCCGCACAACGCCGCACCGTTGTCGTCCTTGCAACGCGACCTGCACACCCTCAAGGGTGGCGCGCGGATGGCCGAGGTCGGACCGGTCGG CGATCTGGCCCATGAACTGGAGAGCCTTTACCAAGGGCTGGTGGACCGCCGTTACAGCCAAAGCGAAGAGCTGGCGCAGTTGCTCCAACAGAGCCATGAC CGTCTGGCACTGATGCTTGAACAGTTGCAACAGCATCAACCCTTGGGCGACCCAAACGAACTGATTGAAGCGATCCGAGCGTTCAGGCAAGGCCACGTGG GCAGTGCCGATGTTGCCGAACCCGCCGCGAGCGACGACTCGACTCATCACGACAGTGAGTTGCTGGACATCTTCCTCGAGGAAGGTTTCGACATCATCGA AAGCTCGGGTGCGGCGCTGGTGCGTTGGCAGGCCGAGCCTTCGAGCCGTCAGGAAGTGGAAACCCTGTTGCGCGACTTGCACACCCTCAAGGGCGGTGCG CGCATGGTGGAAATCGCGCCGATCGGCGATTTGGCCCATGAACTGGAATTCCTCTACGAAGGCTTGTCCGCGGGTGTTCTGAAACCCTCTTCGGCGTTGT TCGAGTTGCTGCAACGCAGCCATGACCGACTGGCGCAAATGCTCGACGCCACCCGTGCCGGTGAGCCATTGCCGCCAGCCGACCGACTGATCGATGCGAT CAAGAATTTCAGCCATCCGGTGGTGCCTGGCGCTGCCACTGCGCCCATCGTGCTGCCCGCCGCCATAAAAACCGAAACCCCGGTACTGCAACCCGACGCC GGTGCAGACATGGTCAAGGTCTCGGCGGAGCTGCTCGACGATCTGGTCAACCTGGCCGGCGAGACGTCGATTTTCCGAGGGCGAATCGAGCAGCAGGTCA GTGATGCTCAAGTGACGCTAAACGAGATGGAAACCACCATCGAGCGGATGCGCGACCAGTTACGCCGCCTCGATACCGAAACCCAGGGCCGGATCCTCAG CCGTCAGCAAGTCGACGCCGAACGCCAGGGCTACGAAGAATTCGATCCGCTGGAAATGGACCGCCACTCACAATTGCAGCAACTGTCGCGCGCCTTGTTC GAATCCGCCTCCGACTTGCTCGATCTCAAGGAAACCCTGGACCGTCGCAACCACGACGCGGAAAACCTGCTCCAGCAGCAGGGCCGCATCAACACCGAGT TGCAGGAAGGGCTGATGCGCACGCGCATGGTGCCGTTCGAACGGATGCTGCCGCGCTTGAAGCGCATCGTCCGTCAGGTGTCCGAGGAGTTGGGCAAGGA CGTCGAGTTCATCGTCGGCAACGCCGAGGGTGAAATGGACCGCAACGTCCTCGAACGCATGGCCGCGCCGCTGGAGCACATGCTGCGCAACGCCGTGGAC CATGGCCTGGAATCCGCCGAAGTGCGGGTCGCAGCGGGCAAACCGGCACAGGGACGGATCACCCTCGACCTGTTGCGCGAGGGCGGCGACATCATTTTCG ATATCCGCGACGACGGCGCCGGTGTGCCGCTGGAAGCAGTGCGACGCAAAGCCATCAAGCGCGGCTTGCTCGATCCGAACAGTGAAATCGGCGACCGCGA CGTACTGCAATTCATCCTGCAACCGGGGTTCTCCACTGCCGAAAAAATTACCCAGATTTCCGGGCGTGGCGTCGGCATGGACGTGGTGCATGAAGAGGTG CGGCAACTGGGCGGCAGCATGAGCATCGACTCGGTGCCTGGGCAGGGCGTGCATTTCCGTATTCGCCTGCCGTTCACGGTGTCGGTCAACCGTGCGCTGA TGGTGCACTGCGGGGAAGATCAATACGCGATCCCGCTGAACACCATCGAAGGCATCGTCCGCGTCTTGCCCAATGAACTCGAAGGGCATTTCCGCCTTGA TCCACCGACGTATGAATACGCCGGGCAACGCTATGAGCTGTGCTATCTGGGCGAGCTGCTGAAAACCAGTCCACGGCCAAAATTGCTGGGCCAGAGCTTG CCGCTGCCAGTGTTGCTGGTGCAATGCAACGAGCGCCACATCGCCGTGCAGGTCGACGCCATGGCCGGCACCCGCGAGATCGTGGTCAAGAGCCTCGGCC CACAGTTTTCGGCGGTGCAGGGCGTGTCCGGGGCGACGATTCTGGGCGATGGCCGGGTGGTGCTGATTCTGGATTTGCTGGCGCCCATCCGCGCCTTGCA AGCGCGCGTGCCACAGCGCCCGGCAACCCATGAACTGGAGGTCGAACCGCAGCGGCCGTTGCTGGTCATGGTGGTCGACGACTCGGTCACCGTGCGCAAG GTCACCAGCCGTTTGCTCGAACGTCACGGCATGAACGTGCTGACGGCCAAGGACGGTGTCGATGCCATGCTGCTGCTCGAAGAGCACCTGCCGGACGTGA TGCTGCTGGACATCGAAATGCCGCGCATGGACGGCTTCGAAGTGGCGACCCAAGTGCGCAACGATGAGCGCTTGCAGCACCTGCCGATCATCATGATCAC CTCGCGCACCGGGCAAAAACACCGCGACCGCGCCATGGCCATCGGTGTCAACGACTACCTCGGCAAGCCGTACCAGGAATCGGTACTGCTCGAAAGCATT GCCCTGTGGAGCAAAACCCATGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGGCTAATGAGCCAGCGCACCAGTAACCTCACCGGCCTGCTGCTGCCCCTGGCCGACCGTAACCTGATCCTGCCCAACGTCGCGGTCGCCGAGCTGATC GATTACCAACCGGCGGCATTCGACCTCGATACGCCACCCTGGTATCTCGGCCGGGTGACGTGGCGTAACCGGCAGATCCCATTACTCAGTTTCGAGTCGG CGTGCGGCCACAAAATCGCCATTGGCGAGCGCGCGCGGATCGTCATTCTCAATGCATTGGGCGGTCGGCCTGAAGTGAAATTCATGGCGATGCTGATTCA GGGGATCCCACGCTCCTACAAGCTCGACAGCCAGTTGAGCTATGTCGACGTGCCGTTGTGCTCGCTGGAAAAAGCGGCGGTGCAGGTGGGTGATCAAGTG GCCAAGGTGCCGGATTTGTTGGCGTTGGAGGAATTGCTGGTGGGGGCGGGGTTGATCTGAAGGTTGAAGATTCCCATAAGGGGACCTAAAGTTCCCTTTT
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| Amino Acid Sequence |
>histidine kinase
MGDRHDYVALEWVKGEIAETLKQAHHAIETQLDDPQATHALSECLACIHQVHGSLQMVEFYGAALLAEEMERLTTALQQNRVSHRDEALHLMLQALGQLP IYLDRVQSARRDLPLVVLPLINDLRSARGESLLSETSLFSPQLPDLPALDEEALKRLEPADLPSVLRKLRQMLQMALVGLLREQDDDTHLGYLATVFSRL ESLCGSAPLSPLWQVASALVEGMRGGAIANSPALRSLFKDADKELKRLLEQGMRAINQPAPPELLKSLLFYIAKAEHPTGQMLTMKDRYGLDEALPDSAM VDEERARLAGPDRDAMRSVLAALCEELVRVKERLDLFVRSDRQHTSDLESLLAPLRQIADTLAVLGFGQPRKVIIDQLAVVLSLAQGQRAPDDAILMDVA GALLYVEATLAGMVGTVEPESQEESRLPTTDLTQIHQIVIKEARICLQQAKDMIVDYIDADWDRQHLQALPALLTQVRGALAMIPLSRAAGLIETCNHFI REHLLLDPGQPGWQELDSLADVIASLEYYLERLNDDPEAPGEQLLDIAEQSLASLGFFPSEQHVPVLEDVLSPSEAQVMQQMQELDGPAIVQTLADVLAS PVSALNPPALTTPGSLLPPPAGEEPVDEELREVFLEETDEVLEILREYLPRWSANPENTSALSEVRRAFHTLKGSGRMVRALVLGELAWAMENLLNRVLE HSVAPGAAVQQLLGEVVELLPELVAEYAADAQRQRNDVDQLAAHAHALAKGEELAADEDTQDVSALDPLLLEIFRKEAETHLASLNRFLDQAAEHVPLQA SDELQRALHTLKGSASMAGVLPIAELAAPLDQLAREYKAHQIALDLDEVEVLLEAEGLFRLGLRQLKSDPLAEIPDAASLIERTQALLVERLASLSNTPS SGLRIKRDPQLINNFLAQGMDILLDAESLLQRWQQHPGERQELSALLDELTTLGEGAHLADLHPVDELCEALLDLYGAVEESSLAVSEAFFHEAQSAHEA LINMLDELAAGQEVSPQPERIRALHGLLDQSLDPSAMGLIRSDGSRSLSIRDLSDATAELAQTAVEKPAQTTVGAGLPAMDSQAPRLSNENASSLTPIAG KPAPTIELDDEIVSIFLEEAVDILESANQALQRWLSEPHNAAPLSSLQRDLHTLKGGARMAEVGPVGDLAHELESLYQGLVDRRYSQSEELAQLLQQSHD RLALMLEQLQQHQPLGDPNELIEAIRAFRQGHVGSADVAEPAASDDSTHHDSELLDIFLEEGFDIIESSGAALVRWQAEPSSRQEVETLLRDLHTLKGGA RMVEIAPIGDLAHELEFLYEGLSAGVLKPSSALFELLQRSHDRLAQMLDATRAGEPLPPADRLIDAIKNFSHPVVPGAATAPIVLPAAIKTETPVLQPDA GADMVKVSAELLDDLVNLAGETSIFRGRIEQQVSDAQVTLNEMETTIERMRDQLRRLDTETQGRILSRQQVDAERQGYEEFDPLEMDRHSQLQQLSRALF ESASDLLDLKETLDRRNHDAENLLQQQGRINTELQEGLMRTRMVPFERMLPRLKRIVRQVSEELGKDVEFIVGNAEGEMDRNVLERMAAPLEHMLRNAVD HGLESAEVRVAAGKPAQGRITLDLLREGGDIIFDIRDDGAGVPLEAVRRKAIKRGLLDPNSEIGDRDVLQFILQPGFSTAEKITQISGRGVGMDVVHEEV RQLGGSMSIDSVPGQGVHFRIRLPFTVSVNRALMVHCGEDQYAIPLNTIEGIVRVLPNELEGHFRLDPPTYEYAGQRYELCYLGELLKTSPRPKLLGQSL PLPVLLVQCNERHIAVQVDAMAGTREIVVKSLGPQFSAVQGVSGATILGDGRVVLILDLLAPIRALQARVPQRPATHELEVEPQRPLLVMVVDDSVTVRK VTSRLLERHGMNVLTAKDGVDAMLLLEEHLPDVMLLDIEMPRMDGFEVATQVRNDERLQHLPIIMITSRTGQKHRDRAMAIGVNDYLGKPYQESVLLESI ALWSKTHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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