Pseudomonas fluorescens C2, NL64_RS07635

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00088
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1711 1724 5.6E-10
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 770 858 2.3E-12
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1251 1348 1.1E-7
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 766 863 9.2E-6
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1111 1211 1.1E-14
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1687 1705 5.6E-10
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1251 1371 9.81E-28
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 770 855 1.8628E-9
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1887 2000 3.8E-35
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 909 1035 4.2E-12
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1542 1726 3.3E-59
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1540 1726 1.1E-51
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 630 760 0.0
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1631 1645 5.6E-10
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 125 2.4E-9
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1108 1239 8.1E-30
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 627 751 1.53E-27
Coils Coil Coil - - 1192 1212 -
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1109 1206 1.1E-6
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 130 1.31E-20
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1801 1861 5.7E-20
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1886 2004 6.12E-36
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1109 1231 9.55E-29
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 432 556 3.3E-14
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1253 1350 2.1E-13
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 629 713 9.3E-14
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 627 723 2.26759E-10
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1249 1375 9.3E-30
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1586 1727 1.5E-22
SMART SM00260 chew_2 IPR002545 CheW-like domain 1719 1863 6.3E-27
Coils Coil Coil - - 1506 1526 -
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1109 1207 7.20198E-15
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1889 2000 5.20848E-31
Coils Coil Coil - - 1433 1460 -
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 97 2.7E-6
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1889 2000 1.7E-26
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1590 1726 4.4E-14
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1543 1724 1.22E-35
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 908 1029 3.35E-14
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1402 1541 4.6E-12
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 767 888 9.03E-20
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1732 1863 1.6E-22
Coils Coil Coil - - 1117 1137 -
Pfam PF02895 Signal transducing histidine kinase, homodimeric domain IPR004105 Histidine kinase CheA-like, homodimeric domain 1403 1540 5.2E-5
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 627 724 1.4E-8
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 627 765 3.4E-28
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1726 1859 3.53E-24
Gene3D G3DSA:3.40.50.2300 - - - 1889 2008 4.3E-39
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1251 1349 2.33122E-13
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 769 897 2.2E-17

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.