Pseudomonas aeruginosa UCBPP-PA14, PA14_71000

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015871 choline transport
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5376
 ECO:0000249
sequence similarity evidence used in automatic assertion		 19919675
Molecular Function GO:0015220 choline transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03415
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015871 choline transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03415
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0055052 ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03415
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00005
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 52 253 3.5E-15
PANTHER PTHR43869 GLYCINE BETAINE/PROLINE BETAINE TRANSPORT SYSTEM ATP-BINDING PROTEIN PROV - - 2 390 0.0
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 46 195 9.6E-28
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 31 294 1.0E-69
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 34 274 8.69E-70
FunFam G3DSA:3.40.50.300:FF:000201 Glycine betaine/L-proline ABC transporter ATP-binding protein - - 31 288 3.7E-116
NCBIfam TIGR03415 JCVI: choline ABC transporter ATP-binding protein IPR022473 ABC transporter, Choline, ATP-binding subunit 4 389 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.