Pseudomonas aeruginosa UCBPP-PA14, PA14_71000

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
TCGTCGCCGCGCACAAGCCGTGGTTCTACACCGCGCTGCGGCCGTTGCTGGACCTGATGCAGACGGTACCGACCTTCGTCTACCTGATCCCGACCCTGAC CCTGTTCGGTCTCGGCGTGGTGCCGGGCCTGATCTCCACGGTGATCTTCGCCGTCGCCGCGCCGATCCGCCTGACCTGCCTGGGTATCCAGGACGTGCCG GCGGAGCTGCTCGACGCCGGCAAGGCCTTCGGCTGCTCGCGCTGGCAACTGCTCACGCGCATCGAGCTGCCGCACGCGATGCCGAGCATCGCCGCCGGCA TCACCCAATGCATCATGCTCTCCCTGTCGATGGTGGTGATCGCCGCGCTGGTCGGCGCCGATGGCCTCGGCAAGCCGGTGGTGAACGCGCTGAACACCGC CGACATCTCCCTCGGCTTCGAAGCCGGCCTGGCCATCGTCCTGCTCGCCATCCTGCTCGACCGGGTGTGCAAGCAGCGCGCCGTGAAGGGGAAATAAGCC
DNA Sequence for Gene
>PA14_71000
ATGACCGCGATCCGATTCGACCATGTGGACGTCATCTTCGGCACCCACACCAAGGAAGCCCTGAAGCTCCTCGACCAGGGCCTCGGCCGCGCCGAGATCC TCAAGCGCACCGGCCAGGTGCTCGGCGTCGAGGACGCCTGCCTGGACGTCAACCGCGGCGAGATCTGCGTGCTGATGGGACTTTCCGGCTCCGGTAAGTC GAGCCTGCTGCGCTGCATCAACGGCCTGAACAAGGTCAGCCGCGGCAAGCTGCTGATCGAGCACGAAGGTTCGCAGGTGGACATCGCCAACTGCTCGCCG GCGACCCTCAAGGCCATGCGCACCAAGCGCATCGCCATGGTGTTCCAGAAGTTCGCCCTGATGCCCTGGCTGACGGTGGCCGAGAACGTCGGCTTCGGCC TGGAAATGCAGGGCCGTCCGGCCGCCGAGCGGAAGAAGCTGATCGACGAGAAGCTCGAGCTGGTCGGTCTCTCGCAGTGGCGCGACAAGCGTCCCGACTC GCTCTCCGGCGGCATGCAGCAGCGCGTCGGCCTGGCTCGCGCGCTGGCGATGGATGGCGACATCCTGCTGATGGACGAACCGTTCTCCGCCCTCGACCCG CTGATCCGCCAGCAATTGCAGGACGAACTGCTGGTGCTGCAACGGCAACTGCACAAGACCATCGTGTTCGTCAGCCACGACCTCGACGAGGCGCTGAAGA TCGGCACCCGCATCGCGATCATGAAGGACGGCCGGATCATCCAGCACGGCAAGCCGGAAGAGATCGTGCTGAGCCCCGCGGACGACTACGTGCGTACCTT CGTCGCCCATACCAACCCGCTCAACGTGCTGTGCGGCCAGAGTCTGATGCGTGGCCTCGACCAGTGCATCCGGCAGAACGACGAGATCTGCTTCGACCAG GGCCGCGACTGCTGGATCGGTCTCAGCGAAGGCGACGTGCTCAAGGGCGCGCGCCAGGGCAGCAACGTCATCGACCTGCAACGCTGGCGCCAGGGCGACC CGGTGGAGAAGCTGCGCCGCGAACCGACCCTGGTGGATGTCAGCATCCGTATGCGCGATGCCCTGCAGATTCGCTACCAGACCGGCCACAAGCTGGTTCT GCAGGAGCAGGACAGGGTGGTCGGGGTGCTCGGCGACAGCGAGCTGTACCACGCGCTGCTGGGCAAGAACCTCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCCCAAGGCCCGCTCGGGACCGCTGCGAATGCCCGGCGCTGCCGGGCATTCGCGTTTATCCTCCGCGCTTTTTCCGTCTGTTCTTCCTTTCGCACGCTC CCGCGCGCCGGTTCCTGCGGCATGCGCCGGGCGCCGGGCGGCAGAAAAGAAAGGCCCGGCGAAACGCCGGGCCAAGTACGCACCTGATTGGCGAGGGCGC CCTAGCGGCGCCGGATTCAGGTCTGGTGCTGGGTTGGCGCCGGCACTGGCTGGTAGGTGCGGCGGTCGCCGACCTGGGCCTCGTAGTCGGCGCGCATGGC CTTGTGCAGGCCGAACATGAACAGGATCAGCACCGCCGAGAACGGTAGCCCGGCGAGCACCACGACGGTTTGCATCGCCGTGAAGTTGCCGGCGAACAGC AGGCCGATGGTGACTAGCGTGACGACGGCCGACCAGAGGATGCGCAGCCAGTTCGGCGCGTCCTCGTCCAGCTCGCCGCCGCTGCGCGAGAGATTGGCCA
Amino Acid Sequence
>lycine betaine/L-proline ABC transporter, ATP-binding subunit
MTAIRFDHVDVIFGTHTKEALKLLDQGLGRAEILKRTGQVLGVEDACLDVNRGEICVLMGLSGSGKSSLLRCINGLNKVSRGKLLIEHEGSQVDIANCSP ATLKAMRTKRIAMVFQKFALMPWLTVAENVGFGLEMQGRPAAERKKLIDEKLELVGLSQWRDKRPDSLSGGMQQRVGLARALAMDGDILLMDEPFSALDP LIRQQLQDELLVLQRQLHKTIVFVSHDLDEALKIGTRIAIMKDGRIIQHGKPEEIVLSPADDYVRTFVAHTNPLNVLCGQSLMRGLDQCIRQNDEICFDQ GRDCWIGLSEGDVLKGARQGSNVIDLQRWRQGDPVEKLRREPTLVDVSIRMRDALQIRYQTGHKLVLQEQDRVVGVLGDSELYHALLGKNLG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site