Pseudomonas lutea DSM 17257, LT42_RS14735
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lutea strain DSM 17257 Contig002, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTTCTCGGTGTTCGTTGAGCCGGTCAACGGTGCGGCGGTTACTGACATCCGTACGCAGCTTGGTCCCACTGTTGCCGTGTCTCGGAAGGTCACGACCCAA AAGGGCGAGGCGATGGTGACCGTGGTCGGAGAGATTCCAATTGGCACAGCCGAGCGTATCGCGTTGTCAATGCGCGACGACGCAGCGGCGGCCACCAGCA CAAACTGATGATGCCGGCCGCCGGTGCCCACTGTGAAAAAGGTTTCATTTGGGGCGTGCCCCGTCTGCGGCCTTTAGATCCGGGCTCTGCCGGCCCTTCT GAAATGTGTAGTGGGGTTTGTCAGTTGCAATCAGGCGTGTTTTTTTCTATAGGTCACAGCTTCCCAGCTGTGGCCTTTGTTGTTTTAGGGCCCAGGCAAC TGGAACAGATGCAGGCGGTGCAGAGATATGCTGCACACGACTGCTTCGCGAGCCCATGGGCTCGTACCGCTTAATCATGCTCGTTGTACACGGGAGCCAT
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| DNA Sequence for Gene |
>LT42_RS14735
ATGTCGATACCACGTTTGAAACCTTATCTGGCCTGGATGGCCGCTGTGCTGATGCTGGGGCAGGCCATCACCGCCCAGGCCGAAGCCTTGCCGGACTTCA CCACGCTCGTGGAGCAGGCTTCCCCTGCCGTCGTCAACATCAGTACCCGGCAGAAGTTGCCGGATCGTGCCGTCGCACAGGGTCAAATGCCTGACCTTGA AGGCCTGCCACCGATGCTGCGCGAATTCCTTGAACGCAGCACGCCACCGGGCTCTCGTGCGCCTGGCGGTGGCAAAGGCGATCGTCAGCGTGAAGCGCAG TCGCTGGGCTCGGGCTTCATCATTTCAGCCGATGGCTTCATTCTCACCAACAATCACGTTATCGATGGTGCCGACGAGATTCTCGTACGGCTTTCCGATC GCAGCGAGATGAAGGCCAAACTGATCGGTACTGACCCGCGCACTGACGTGGCCGTCCTGAAAATCGATGGCAAAGACTTGCCCACCGTCAAGCTGGGTAA CTCCGACAAGCTGAAGGTGGGCGAATGGGTTCTGGCCATCGGCTCGCCATTCGGCTTCGATCACTCAGTGACCAAGGGCATTGTCAGTGCCAAGGGCCGC AGTCTGCCCAACGACACGTACGTCCCCTTCATTCAGACCGACGTAGCGATCAACCCGGGTAACTCGGGCGGGCCGCTGTTCAACATGGCGGGTGAAGTGG TGGGCATCAACTCACAGATCTTCACGCGGTCAGGCGGCTTTATGGGCCTGTCGTTCGCGATCCCTATCGACGTAGCCATGGACGTTGCCAACCAGCTTAA GGCGAGCGGCAAGGTCAATCGCGGCTGGCTTGGGGTCGTGATTCAAGAAGTGAACAAAGACCTGGCCGAATCCTTCGGTCTGGACAAGCCGGCGGGTGCT CTGGTTGCCCAGGTGCTTGACGACGGGCCGGCGGCCAAAGGCGGCTTGCAGGTGGGTGACGTGATCCTGAGCGCCAATGGCACTCCGATCATCATGTCTG CGGATCTGCCACACCTTATCGGTAATCTGAAAGACGGCAGCAAGGCCGAGCTTGAGGTGATCCGCGACGGCAAACGGCAGAAACTCACTGTGACTGTCGG CGCGTTGCCTGCAGAGGGTGAGGAGATGGGCGCGGCAGATGCCGGTGTCGAGCGCAGCAGCAATCGACTGGGCGTTTCGGTCGTGGACCTGACCGCCGAG CAGATGAAATCGCTGGACCTCAAAGGCGGCGTTGTCATCAAGGATGTCCAGGACGGTCCGGCTTCCTTGATCGGGTTGCAGGCAGGTGATGTCATCACCC ACCTGAACAACCAGGCCATCACTTCGTCGAAGCAGTTCACTGAAGTGGCGAAAGGGCTGCCGAAGAATCGCTCGGTGTCCATGCGCGTTCTGCGTCAGGG CCGCGCGACATTCATCACGTTCAAGCTGGCCGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGGTCACGATGAACAAGAAGGAGCGGTTGATCCGCTCCTTTTTTTATGCTCGAAACTGCACGCCGCCTGGCCTCTGCGTGTGAACGTGACGCCTGAACG TTCCTTCAGGTACAATTCCCGGCTATTTTTGGCGGGCAGTCTGCCTGCAACCTATTTCGAGTGTTGATCCGTGAGTGATTTGAGTCATATCCGCAATTTC TCCATCATCGCCCACATTGACCATGGCAAGTCGACGCTGGCTGACCGGTTCATCCAGATGTGCGGCGGCCTGTCCGAGCGCGAGATGGAAGCCCAGGTGC TGGACTCCATGGACCTGGAGCGCGAGCGCGGAATCACGATCAAAGCCCACAGCGTCACTCTGTACTACAAGGCGAAGGACGGGATCACCTACCAGCTCAA CTTCATCGACACCCCTGGTCACGTTGACTTCACGTATGAAGTCAGCCGCTCGCTGGCGGCATGTGAGGGTGCGTTGCTGGTGGTTGATGCGGGTCAGGGC
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| Amino Acid Sequence |
>serine peptidase
MSIPRLKPYLAWMAAVLMLGQAITAQAEALPDFTTLVEQASPAVVNISTRQKLPDRAVAQGQMPDLEGLPPMLREFLERSTPPGSRAPGGGKGDRQREAQ SLGSGFIISADGFILTNNHVIDGADEILVRLSDRSEMKAKLIGTDPRTDVAVLKIDGKDLPTVKLGNSDKLKVGEWVLAIGSPFGFDHSVTKGIVSAKGR SLPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGINSQIFTRSGGFMGLSFAIPIDVAMDVANQLKASGKVNRGWLGVVIQEVNKDLAESFGLDKPAGA LVAQVLDDGPAAKGGLQVGDVILSANGTPIIMSADLPHLIGNLKDGSKAELEVIRDGKRQKLTVTVGALPAEGEEMGAADAGVERSSNRLGVSVVDLTAE QMKSLDLKGGVVIKDVQDGPASLIGLQAGDVITHLNNQAITSSKQFTEVAKGLPKNRSVSMRVLRQGRATFITFKLAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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