Pseudomonas lutea DSM 17257, LT42_RS14735

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004252 serine-type endopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00834
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13180
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02163
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 207 224 7.7E-52
FunFam G3DSA:2.40.10.120:FF:000007 Periplasmic serine endoprotease DegP-like - - 31 268 9.2E-100
Pfam PF02163 Peptidase family M50 IPR008915 Peptidase M50 416 470 2.1E-6
PANTHER PTHR22939 SERINE PROTEASE FAMILY S1C HTRA-RELATED - - 30 367 5.4E-95
Pfam PF13180 PDZ domain IPR001478 PDZ domain 390 469 1.1E-10
SUPERFAMILY SSF50156 PDZ domain-like IPR036034 PDZ superfamily 389 476 4.07E-15
Pfam PF13365 Trypsin-like peptidase domain - - 103 236 9.0E-34
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 133 153 7.7E-52
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 315 327 7.7E-52
SUPERFAMILY SSF50494 Trypsin-like serine proteases IPR009003 Peptidase S1, PA clan 10 284 7.36E-69
Gene3D G3DSA:2.40.10.120 - - - 30 268 2.3E-85
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 112 124 7.7E-52
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 229 246 7.7E-52
MobiDBLite mobidb-lite consensus disorder prediction - - 76 98 -
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 173 197 7.7E-52
SMART SM00228 pdz_new IPR001478 PDZ domain 275 357 9.7E-14
SUPERFAMILY SSF50156 PDZ domain-like IPR036034 PDZ superfamily 246 370 4.72E-23
Pfam PF13180 PDZ domain IPR001478 PDZ domain 277 366 4.0E-17
Gene3D G3DSA:2.30.42.10 - IPR036034 PDZ superfamily 384 478 1.0E-17
Gene3D G3DSA:2.30.42.10 - IPR036034 PDZ superfamily 273 372 6.2E-28
Pfam PF02163 Peptidase family M50 IPR008915 Peptidase M50 244 380 1.4E-9
CDD cd00987 PDZ_serine_protease - - 275 364 1.07423E-25
NCBIfam TIGR02037 JCVI: Do family serine endopeptidase IPR011782 Peptidase S1C, Do 32 474 0.0
CDD cd00987 PDZ_serine_protease - - 389 474 8.40868E-17
SMART SM00228 pdz_new IPR001478 PDZ domain 388 467 6.1E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.