Pseudomonas lutea DSM 17257, LT42_RS00290

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas lutea DSM 17257
GCF_000759445.1|latest
Locus Tag
LT42_RS00290
NCBI Old Locus TagLT42_00295
Name
Synonym: LT42_00295
Replicon Contig001
Genomic location 61066 - 63480 (+ strand)

Cross-References

RefSeq WP_037008886.1
GI 739144115
INSDC KGF64469.1
NCBI Locus Tag LT42_RS00290
NCBI Old Locus Tag LT42_00295
UniParc UPI0005130DCD
UniProtKB Acc A0A098SXV0
UniProtKB ID A0A098SXV0_9PSED
UniRef100 UniRef100_A0A098SXV0
UniRef50 UniRef50_Q9HWL3
UniRef90 UniRef90_A0A098SXV0

Product

Feature Type CDS
Coding Frame 1
Product Name
ligand-gated channel
Synonyms
Evidence for Translation
Charge (pH 7) -19.38
Kyte-Doolittle Hydrophobicity Value -0.432
Molecular Weight (kDa) 88.0
Isoelectric Point (pI) 4.86

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001486 (1037 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: LT42_RS00290

Human Homologs

References

No references are associated with this feature.