Pseudomonas aeruginosa UCBPP-PA14, PA14_54390 (mucD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAGAAATGATCGAGGAGCAGGGGCGAGTGGTGGCGACCGAGCCGGGAGCGGTATGGGTCGAGACCGTGCGCCGCAGTACCTGCTCGTCCTGCTCGGCCAA TGCCGGTTGCGGCCAGGGGCTGATGCAGCGCCTGGGCGTCGGCGCGGGGCGTGCCCGGGTGCGCGCGTTGAGCGACCTGAGCCTGCGGGTCGGCGATGCG GTCGTCCTAGGAATTCATGAAGACCTGTTGTTGCGCGCCTCCGTCTTCTTCTATCTTTTCCCTCTGCTCGGGTTTTTCGTGGCAGCATTGCTGGCGACCC GGGCGGGCCTTGTCGAACCTCTGATCATCGTGTCCGGGCTGGCGGGTTTGCTGGCGGCCTGGCTATTGGTGCGTCGGCATGCTCGTCGTCATGCCGATGA TCCAGCCTCGCAGCCGGTGGTTCTGCGAGCGCTGATTTCCGGGCCGTCCGATTCGGCCTGAGTCTTTCTCTTCCCTCGAACATCACGGGAGCTGTAGTCG
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| DNA Sequence for Gene |
>PA14_54390
|mucD
ATGCATACCCTAAAACGCTGTATGGCTGCGATGGTGGCCTTGCTGGCCTTGAGCCTGGCGATGACGGCCCGGGCAGAACTGCCGGACTTCACGCCTTTGG TCGAACAGGCGTCGCCGGCGGTGGTGAATATCAGTACGCGGCAGAAGCTGCCGGATCGCGCCATGGCGCGCGGGCAGCTGTCGATCCCCGACCTCGAAGG GCTGCCGCCGATGTTCCGCGACTTCCTCGAGCGCAGCATCCCGCAGGTTCCGCGCAATCCGCGCGGCCAGCAGCGCGAGGCGCAATCGCTGGGCTCCGGC TTCATCATCTCCAACGACGGCTACATCCTCACCAACAATCACGTCGTGGCCGATGCCGACGAGATCCTGGTGCGCCTGTCCGACCGTAGCGAGCACAAGG CCAAGCTGGTCGGCGCGGACCCGCGCAGCGACGTGGCGGTGCTGAAGATCGAGGCGAAGAACCTGCCGACCCTGAAACTGGGCGATTCGAACAAGCTGAA AGTGGGCGAATGGGTCCTGGCCATCGGTTCGCCGTTCGGCTTCGATCACTCGGTCACCGCCGGTATCGTCAGTGCCAAGGGGCGTAGCCTGCCGAACGAG AGCTACGTACCCTTCATCCAGACCGACGTGGCGATCAACCCGGGCAACTCCGGCGGTCCGCTGCTGAACCTGGAGGGCGAAGTGGTCGGCATCAACTCGC AGATCTTCACCCGTTCCGGCGGCTTCATGGGCCTGTCCTTCGCCATCCCGATCGATGTCGCGCTGAACGTCGCCGACCAGTTGAAGAAAGCCGGCAAGGT CAGCCGCGGCTGGCTGGGTGTGGTGATCCAGGAAGTGAACAAGGATCTCGCCGAGTCCTTCGGCCTCGACAAGCCGTCCGGCGCGCTGGTGGCGCAGCTG GTGGAAGACGGTCCGGCGGCCAAGGGCGGCCTGCAGGTGGGCGATGTGATCCTCAGCCTGAACGGCCAGTCGATCAACGAGTCCGCCGACCTGCCGCACC TGGTGGGCAACATGAAGCCGGGCGACAAGATCAACCTGGACGTGATTCGCAACGGCCAGCGCAAGTCCTTGAGCATGGCGGTAGGCAACCTTCCGGACGA CGACGAGGAAATCGCCTCGATGGGCGCTCCGGGCGCCGAGCGCAGCAGCAACCGCCTGGGCGTGACCGTCGCCGACCTGACCGCCGAGCAGCGCAAGAGC CTGGATATCCAGGGCGGCGTGGTGATCAAGGAAGTCCAGGACGGTCCGGCCGCGGTCATCGGCCTGCGTCCGGGCGATGTCATCACCCACCTGGACAACA AGGCGGTGACCTCGACCAAGATCTTCGCCGACGTGGCCAAGGCCCTGCCGAAGAACCGTTCGGTTTCGATGCGGGTACTGCGCCAGGGGCGCGCCAGCTT CATCACCTTCAAGCTGGCCGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGGCTGGCGAAAAAAGGGCGGTTTCCACCGCCCTTTTTCATGCCCGTCAATCCGTTACCTGCGTGACGCCTTGCCCGAGCATCAGGTAAACTCCCCGG CTATTTTTCGGCGGATTGCCGCCCTTGCCCTTTTCGAGTGTGTTGAGCCGTGAGCGACCTGAGCCATATCCGCAATTTCTCCATCATTGCCCATATCGAC CATGGCAAGTCGACGCTGGCCGATCGCTTCATCCAGATGTGCGGCGGTCTCTCCGATCGCGAAATGGAGGCCCAGGTCCTGGACTCCATGGACCTGGAGC GCGAGCGCGGGATCACCATCAAGGCCCACAGCGTGACCCTGCACTACAAGGCGCAGGACGGTAAGACCTACCAGCTCAACTTCATCGATACCCCCGGCCA CGTCGACTTCACCTACGAAGTCAGCCGCTCGCTGGCCGCCTGCGAGGGCGCGCTGCTGGTAGTGGACGCCGGCCAGGGCGTCGAGGCGCAGTCCGTCGCC
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| Amino Acid Sequence |
>serine protease MucD
MHTLKRCMAAMVALLALSLAMTARAELPDFTPLVEQASPAVVNISTRQKLPDRAMARGQLSIPDLEGLPPMFRDFLERSIPQVPRNPRGQQREAQSLGSG FIISNDGYILTNNHVVADADEILVRLSDRSEHKAKLVGADPRSDVAVLKIEAKNLPTLKLGDSNKLKVGEWVLAIGSPFGFDHSVTAGIVSAKGRSLPNE SYVPFIQTDVAINPGNSGGPLLNLEGEVVGINSQIFTRSGGFMGLSFAIPIDVALNVADQLKKAGKVSRGWLGVVIQEVNKDLAESFGLDKPSGALVAQL VEDGPAAKGGLQVGDVILSLNGQSINESADLPHLVGNMKPGDKINLDVIRNGQRKSLSMAVGNLPDDDEEIASMGAPGAERSSNRLGVTVADLTAEQRKS LDIQGGVVIKEVQDGPAAVIGLRPGDVITHLDNKAVTSTKIFADVAKALPKNRSVSMRVLRQGRASFITFKLAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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