Pseudomonas aeruginosa UCBPP-PA14, PA14_54390 (mucD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004252 serine-type endopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02037
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02037
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50156
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Putative enzymes Other UCBPP-PA14 genes in this class
Cell wall / LPS / capsule Other UCBPP-PA14 genes in this class
Secreted Factors (toxins, enzymes, alginate) Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau01503 Cationic antimicrobial peptide (CAMP) resistance 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 202 219 3.6E-53
SMART SM00228 pdz_new IPR001478 PDZ domain 270 352 3.9E-15
PANTHER PTHR22939 SERINE PROTEASE FAMILY S1C HTRA-RELATED - - 23 361 1.3E-101
Pfam PF13180 PDZ domain IPR001478 PDZ domain 386 466 2.0E-9
Pfam PF02163 Peptidase family M50 IPR008915 Peptidase M50 239 376 6.3E-11
CDD cd00987 PDZ_serine_protease - - 270 359 9.02374E-27
SMART SM00228 pdz_new IPR001478 PDZ domain 384 463 8.0E-11
Gene3D G3DSA:2.40.10.120 - - - 27 263 2.2E-85
Gene3D G3DSA:2.30.42.10 - IPR036034 PDZ superfamily 381 474 1.9E-17
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 224 241 3.6E-53
Pfam PF13365 Trypsin-like peptidase domain - - 98 231 8.7E-35
FunFam G3DSA:2.30.42.10:FF:000037 Periplasmic serine endoprotease DegP-like - - 268 369 1.6E-34
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 168 192 3.6E-53
SUPERFAMILY SSF50156 PDZ domain-like IPR036034 PDZ superfamily 385 472 5.39E-15
FunFam G3DSA:2.40.10.120:FF:000007 Periplasmic serine endoprotease DegP-like - - 28 263 2.9E-106
CDD cd00987 PDZ_serine_protease - - 385 470 3.5521E-17
Pfam PF13180 PDZ domain IPR001478 PDZ domain 272 359 2.8E-17
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 128 148 3.6E-53
NCBIfam TIGR02037 JCVI: Do family serine endopeptidase IPR011782 Peptidase S1C, Do 28 470 0.0
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 107 119 3.6E-53
Gene3D G3DSA:2.30.42.10 - IPR036034 PDZ superfamily 268 369 3.2E-28
SUPERFAMILY SSF50494 Trypsin-like serine proteases IPR009003 Peptidase S1, PA clan 6 279 4.84E-70
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 310 322 3.6E-53
SUPERFAMILY SSF50156 PDZ domain-like IPR036034 PDZ superfamily 252 358 4.05E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.