Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ACCAGCAGCGCGACGCTCCAGCGATAGCCGGGGAAGTCGTGGCTGAGCCAGGCGGGGCTGATATAGCAGCGAACATCGATTTCAGCGCCGTTCATCGCCT GCTCGATGCGCCCGCGCGGGTAGGGGTGGTAGAGCGCCTTGCGGCCGACCTGCCGGGCCAGGGAGCGGGTGATGTCGTAGACGATGCCGTCGATCGGCTG GCCCCGTTCCAGGCGGATCAACGGCATGCTCCAGCTTTCCATCACCGAGAAGCGCAATGGCGTCGCGTCGTTCTCCGTGGCCGTCGCTGGCAGGGCCGCG AGCAACTGCAGCAGGAGCAGCGCCGGTGCGCCGAAATGAGGCATGAACGAAGTCAGGGAGGGTAGAGTCATTGCCACCGACGAGGGCTGCTGAAGGGCCA GGGGAATTCTTAGCACGCAGTTTGCCAAGTCAGCGAGCGCAGAAGGGGTAAATTGCGCTAGCATTGGCCGACTTGTGCTTCCCTTCTGCGACGGTTTTCG
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DNA Sequence for Gene |
>PA14_44630
|dnaX
ATGAGTTATCAAGTTCTTGCGCGTAAATGGCGTCCCCGTTCCTTCCGTGAAATGGTCGGCCAGACCCATGTGCTCAAGGCTCTGATCAACGCCCTGGACA ACCAGCGGCTGCACCATGCCTACCTGTTCACCGGTACCCGCGGGGTCGGCAAGACCACCATCGCGCGGATCCTGGCCAAGTGCCTGAACTGCGAGACCGG GGTCAGTTCCACGCCGTGCGGCGAATGCTCGGTCTGTCGCGAAATCGACGAAGGCCGCTTCGTCGACCTGATCGAAGTGGACGCCGCGAGCCGGACCAAG GTCGAGGATACCCGCGAGTTGCTCGACAACGTGCAGTACTCGCCGACCCGCGGCCGCTACAAGGTCTACCTGATCGACGAAGTGCACATGCTCTCGTCAC ACAGTTTCAATGCGCTGCTCAAGACCCTCGAGGAGCCGCCGCCGCACGTCAAGTTCCTGCTGGCCACCACCGACCCGCAGAAGTTGCCGGTGACCATCCT CTCGCGCTGCCTGCAGTTCTCCCTGAAGAACATGCCGCCGGAGCGGGTGGTCGAGCACCTGACCCACGTGCTCGGAGCCGAGAACGTGCCCTTCGAGGAT GACGCCCTGTGGTTGCTCGGGCGCGCCGCCGACGGCTCGATGCGTGACGCCATGAGCCTGACCGACCAGGCCATCGCCTTCGGCGAGGGCAAGGTGCTGG CCGCAGACGTGCGGGCGATGCTCGGTACCCTCGATCACGGCCAGGTCTATGGCGTGCTCCAGGCCTTGCTGGAGGGCGATGCGCGCGCTCTGCTCGAAGC GGTGCGCCACCTGGCCGAGCAGGGGCCGGACTGGGGCGGCGTGCTTGCCGAAATACTCAACGTGCTGCACCGCGTCGCGATCGCCCAGGCCCTGCCGGAA GCGATCGACAATGGCCAGGGCGACCGCGAGCGGGTGCTGGCCCTGGCCCAGGCGTTGCCGGCGGAAGACGTACAGTTCTATTACCAGATGGGCCTGATCG GCCGCCGCGACCTGCCGCTGGCGCCCGATCCGCGTAGCGGCTTCGAGATGGTGTTGCTGCGGATGCTCGCGTTCCGCCCGGCGGACGCCGACGGCGCGCC GAGGACGCCGCTAAAGGACCTGGGGATCAGCAAGGCCACGACTGATCCCGCCAACTCCCCCGTGGCCGGCGCGGCCTCGCCTGCGCCGGTCGCTGCCGTT GCTGCCGCGCCTGTCGTGGCTGCGCCCGTCGAAGCCCCGGCTGCCCCGGCGGCAGCGCCATCCGCGCCACCGGCGGCGGTCGAGGTGCGCGTCGCGGAAG CGGTTGTCGAAGAGCCCGCCGCCGCGGCAGAGGTCGTCGACTTGCCCTGGGAAGAGCCGGCGCCGAGCCTCGCTGCCGAGCCCGAGCCCGAGCCCGAGCC CGAGCCCGAGCCCGAGCCCGAGCCCGAGCCCGAGCCCGAGCCCGAGCCGCTAGCCGTGGAGGCTCCCTCGGCCCCTCCGGCAGTGGCGGTCGAGGCGGTG GTGGAAACCGTTCTGGAAGCCCTGCCGGCTGCGTTGCCGGTAGCACCTGACGAGCAGGACGAGCAGGACGAGCAGGACGAGCAGGACGACGAGCCACCGC CCGCGGACGACTACTACGAAGTCGACATGGATACCCTGGCCTACCTGGATGCCGCGCCCGAGCCTGACGTGGTCGTGGTGGAGGAGCCGCTGCCGGCGGC GAAGCCGGCCACCGGCCTGGCCGCGGAGTGGCTGGAGCTGTTCCCGCGGCTCGGCCTCGGCGGCCTGACCGCCAGCATCGCTGCCAACTGTACGCTGGTA GCTGCCGACGACGACCAATGGCATCTGCATCTCGATCCGGGCCAGAGCGCGCTGTTCAACGCCACCCAGCAGCGGCGGCTGAACGATGCGCTGAACCAGC ACCTGGGGCGCACCCTCAAACTGGAGGTGACCCTGCAGAAGCCTGAGCAGGAGACCCCGGCCCAGGCAGCGGCACGCCGGCGTGCCGAGCGCCAGCGGGC GGCCGAGGCATCGATCGATGCCGACCCGTTGGTCCGGCAGTTGCGCGAGCAGTTCGCCGCGGTGGTCCGTGACGGTACCATCGAACCTTTGGAAGCCAAG GCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGGCGCTTGGCGCACGCAACAAGACGACATTCGAGGTGAAGAACATGATGAAAGGTGGCATGGCCGGCCTGATGAAGCAGGCGCAGCAGATGCAGGAAA AGATGCAGAAGATGCAGGAAGAGCTGGCCAACGCGGAAGTGACCGGGCAATCCGGCGCCGGTCTGGTCAGCGTGGTGATGACCGGGCGCCACGACGTCAA GCGCGTCAGCCTGGACGACAGCCTGATGCAGGAAGACAAGGAAATCCTCGAAGACCTGATCGCCGCCGCGGTCAACGATGCGGTGCGCAAGATCGAGCAG AACAACCAGGAAAAGATGTCCGGCTTCACCTCGGGCATGCAACTGCCGCCCGGCTTCAAGATGCCCTTCTGATTCTGCGTTCGTGCCGGGTCCGCCTTCT TAGGACGGCGCCCGGCAGCCATTCCCCTCCCTCTATCCGACGAGTCCTGCATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCT
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Amino Acid Sequence |
>DNA polymerase III subunits gamma and tau
MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARILAKCLNCETGVSSTPCGECSVCREIDEGRFVDLIEVDAASRTK VEDTRELLDNVQYSPTRGRYKVYLIDEVHMLSSHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFSLKNMPPERVVEHLTHVLGAENVPFED DALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAMLGTLDHGQVYGVLQALLEGDARALLEAVRHLAEQGPDWGGVLAEILNVLHRVAIAQALPE AIDNGQGDRERVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRSGFEMVLLRMLAFRPADADGAPRTPLKDLGISKATTDPANSPVAGAASPAPVAAV AAAPVVAAPVEAPAAPAAAPSAPPAAVEVRVAEAVVEEPAAAAEVVDLPWEEPAPSLAAEPEPEPEPEPEPEPEPEPEPEPEPLAVEAPSAPPAVAVEAV VETVLEALPAALPVAPDEQDEQDEQDEQDDEPPPADDYYEVDMDTLAYLDAAPEPDVVVVEEPLPAAKPATGLAAEWLELFPRLGLGGLTASIAANCTLV AADDDQWHLHLDPGQSALFNATQQRRLNDALNQHLGRTLKLEVTLQKPEQETPAQAAARRRAERQRAAEASIDADPLVRQLREQFAAVVRDGTIEPLEAK A
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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