Pseudomonas nitroreducens Aramco J, QX33_RS29170
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas nitroreducens strain Aramco J contig21, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGCCGAGCCTGTTTTTAAGCACCTGGTCAAACGCTTTCGCCTCGACCTGAATCTGGCGAATCCAAGGCGCCACGGCAAAGCAGCGGTCGAAGCTATCGA ACTGGCGCTTGGTGTATGAGCCTGTGCGACCTGCGGGGATGATGAACCACCCGGCTTGTACGGCGTCGACCACGGCACGGACTGACGCGGGCGTAGCGTC ATCGCATACGCCCTTGCTGGCAAGCAGCCGGCGTGCGGCCTGTAGGCATTCCGGGTTGGTCAGCGCTTTGCGATTGATCTGATGCATTTCGAGTCCTCCG TCATGCCTTCATCCTCTCGCGTGTATTCGAGTGCCAGAACCACCCGCCATTCCTTGAACTGCCTGATGACGAAACCCGACATTGCGCCACGGCTTTGAGT CGCCTTCAGTCTGAATCGCCACTGCACTGCGGGTTCAGGTACGGACCTTCGGATTCGGGGCACTCCCTGGACACTATTAGGGCGAGGAGACCCTCCCCTG
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| DNA Sequence for Gene |
>QX33_RS29170
ATGATCAGTTCCGTAAACCATGCCCTACAGACGTCCTGGTGGTTACAGGTGCGGCCGAGGCCGACGCTTCGCCATCTGGATGTCCTTCGCCAGATCCTGG CCAACTCGGTGCACGCCCTCTCTGGCATTGCCGGCGGGGCGGACTATGCAGCCAGTGTTCGAGGGCTACTCGCCGTAACCAATCGAGCGTCCTCGCTCTC TGACGCCGTAATCTCCGAGGTCGATTGCATGATGGAAGAACTTCAAACCATAAGCCGTAGAGCGAATGACACATTGGCCAAGGGCAAAGGACCAGCTGCC CTTTTCGTTCCTGGTTTTGGTGACCGGTCGCAGGATTTGGCCCGCGGACTCCAGGCAATGGGGGCGAATGTGCTGGCGCTGGGGGTTGGAATGCAGATCA AACCCGAAGATCGGGAGGCAATTCGACGCTCAAGCATGATTCTGGTCGGCTCTGGGTTGCTTGGTGATTCCGAGGGCCTGGCCTTCGTTGAGTCCCTCGT TGCAGCTTCAGAGGCAGATTCCTTGGTGGTGCTGGTTGCAGAGAGTGGAGCCCTATCCTTCGAGCAGCGCCGGGTAGCCACGGTATTGGGCCAGGTTCGA ATCCTTTCCCAGGATGACGATATCCGTCAGCTCAGAAGCCTGTTCAGGAGTAGGAACCGTGATATCGAGATTGAGGGGTATCGGGTGCTGCTGCTCGATG ACTCCAGAACTGACGCTTACGTCGCTCAGAAGATCATGACCGAGGCAGGGCTGGTGGTTGAGCACATCCATCACCCAAGTCAGGTACTGGACGCGATCAG CAGGTTCCGGCCGGACGTGCTTGTCAGTGACTTCCACATGCCGGACGCGAATGGTGACGTTGTAGCCTCAATCATCCGGCAGGATCGGGACGCGACCATC CCCATCATCTTCCTCAGCCGGGAATCGAATGCTGAGCGTCAACTGCTGGCGCTGTCGAGAGGGGCTGATGGCTTCGTGCAGAAGCCATTGAAGCGCGACG CCTTCATTCGGGCGCTGAAGTCGATTGTCAGCCGATCTAAGGCTGTCGAGTCGAGGATGCGACGTGATCCCCTGACGAACCTCCTGAACAACGGCCAATT CATGACGTCGGCCGGAGCTGTCCTCGCCGAGGGTCGCCCAAGCTCCTTGGTCCTCATCGACATCGACCACTTCAAGACGGTCAACGACACCTTTGGGCAC CCAATCGGTGATCGGGTCCTTGTGGGCCTGGCTGAGGTGCTGTCCGATTCGCTTCGCTCCGAAGACCACGTCGGCCGCATCGGGGGAGAGGAGTTTGCCA TCGCGATGGTCGGCGCGAACCAGGAACAGTCGAAGAGTGTGGTGGACAGGCTGCGGACGGTTTTCACGTCGATTCAGTTCCAGGCCGAAGATGGGAGCTC GTTCAGCTGTTCGTTCAGCGCCGGCGTGTCCGATCTCCGCAACTCGGTGAAAGAGTCGATCCGATTCGCTGACGAGGCGCTGTACACAGCAAAACGGAAT GGTCGGGACCGGGTGGAGGTTTCCCCCGGTAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCACCAAAAGAAAAGCCCCGCATTGCGGGGCTTTTTTGTTTCCGTCGATCAGGCCTGGAGTGTAGAGCTTCGAGTTGGGAATTCACGCACATTGTCGCGC ACAGGTTGCGGCTCAACATCCAATGCCGAAGATTCGATCCCTACATCCTCATCGACGGGTTCAGCCTCGTGAATCAGTCCCAGAAGGGCTCGCTCCATCA TCTCATCGGTATCGAACTCGGCAACCGGGAAATCGAGCGGCATCTCGACCTTCTCCAGCAGGTGCTTGAGGTCCCCGTGGGTCAGGCAGGGCTGGATACG CATCAGCCTGACGAGTTGCAGGATGGTTTCCTTGTTCATTTCGGCTGCGGCAAGGCACCGAGACCAGACGTTTTTGCGGATCATGCCAAGGCGCGCTGCC TTGAGTGTGGCCTCCGCTTCGCTCGCCGGAGCCAGGAAGGCATGGCGGCCGTCACCAAGCATCAGGAACTTCAGCGCCAGGTCGTCGAAGCTCTGCAGGT
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| Amino Acid Sequence |
>regulator
MISSVNHALQTSWWLQVRPRPTLRHLDVLRQILANSVHALSGIAGGADYAASVRGLLAVTNRASSLSDAVISEVDCMMEELQTISRRANDTLAKGKGPAA LFVPGFGDRSQDLARGLQAMGANVLALGVGMQIKPEDREAIRRSSMILVGSGLLGDSEGLAFVESLVAASEADSLVVLVAESGALSFEQRRVATVLGQVR ILSQDDDIRQLRSLFRSRNRDIEIEGYRVLLLDDSRTDAYVAQKIMTEAGLVVEHIHHPSQVLDAISRFRPDVLVSDFHMPDANGDVVASIIRQDRDATI PIIFLSRESNAERQLLALSRGADGFVQKPLKRDAFIRALKSIVSRSKAVESRMRRDPLTNLLNNGQFMTSAGAVLAEGRPSSLVLIDIDHFKTVNDTFGH PIGDRVLVGLAEVLSDSLRSEDHVGRIGGEEFAIAMVGANQEQSKSVVDRLRTVFTSIQFQAEDGSSFSCSFSAGVSDLRNSVKESIRFADEALYTAKRN GRDRVEVSPGS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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