Pseudomonas nitroreducens Aramco J, QX33_RS29170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 225 355 3.13E-26
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 355 504 3.5E-33
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 351 507 2.2E-38
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 348 508 6.5E-42
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 352 508 4.9E-44
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 358 507 4.16E-38
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 227 339 1.7E-19
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 229 339 5.2E-17
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 159 508 3.3E-60
CDD cd01949 GGDEF IPR000160 GGDEF domain 354 505 7.10347E-49
SMART SM00267 duf1_3 IPR000160 GGDEF domain 342 508 3.8E-42
Gene3D G3DSA:3.40.50.2300 - - - 216 351 2.4E-25
CDD cd00156 REC - - 230 329 3.44989E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.