Pseudomonas nitroreducens Aramco J, QX33_RS03195
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCGCCAGCGG-N68-CCGCTGGCGC | 686777 | 686864 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCGCCCAGGTC-N42-GACCTGGGCGC | 687214 | 687277 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AAGCCCCGCA-N1-TGCGGGGCTT | 689369 | 689389 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GTGGAGCGAAGCGATACCCATC-N20-GATGGGTATCGCTTCGCTCCAC | 689436 | 689499 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GTAGGGCGCA-N55-TGCGCCCTAC | 689530 | 689604 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GTTATCCGCCG-N8-CGGCGGATAAC | 689552 | 689581 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 169 | 689365 | 689393 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 171 | 689371 | 689387 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |