| Internal ID | 18133625 | Source Database | TransTermHP TERM 171 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 171
|
| Sequence |
GCCCCGCATTGCGGGGC Look for more occurrences |
| Start | 689371 |
| End | 689387 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas nitroreducens strain Aramco J contig1, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GGCCTGAACGGAGAA(5' tail) GCCCCGC(5' stem) ATT(loop) GCGGGGC(3' stem) TTTTTCTTGCTTTCG(3' tail). Confidence: 100. opp_overlap 689371, overlap 689365 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|