Pseudomonas aeruginosa UCBPP-PA14, PA14_21880 (tsp)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
AGCCAGGCCGTGGCGTAGACCTCCGGAATCCCCGCCGCCTCCGCCAGGCTCAGCCCTGCCGGGACCGGCAGTACGTGGCGCGCGTCCACCACCACTTCCT CGGCCATGCCGCCGCCGGCGAGCAGCGCGCAGACCCGGTCGCCGACCTGCCAGGTGCTGCCCGCGCCCACCTCGCTGACCACACCCGCACACTCGAGCCC CAGCGCCGGGCTGGCGCCGGGTGGCGGCGGGTAGAGCCCGGCCTTCTGCAACAGGTCGGCGCGGTTGAGTCCGGCGGCCGCCACGCGGATGCGGATTTCG CCCTGACCGCAGGACGGGGCGGCGATTTCCGACCACTCGACACGACCTTCGATACCTTGCAATGCGTTCACGCTGCCTCCATAGTGGGGTTGTCACGGCC CGATCACCCAGAGTCGGGCTTTTTGCATTGCGCCAAGGGAACCCGGCGCCGGCTAATAAGGCCTAATATGCGTCATTACTCCGCGATCAGTCGAATCAGC
DNA Sequence for Gene
>PA14_21880 |tsp
ATGAAGCGTTTTCTGCCCCGTACCGCCCTGTTGCTCCTCCTCGGCGCCAGTTCGCTGCCGCTGTTCGCCTCGACCGCCGTCTCCGTCGGCAGCGCCCAGA ATTCCTGGGACAGCCTGCAGCCGGACCGCGAGCAGGTCATCGCCAGCCTCAACGTAGTGGAGCTGCTCAAGCGGCACCACTACAACAAGCCGCCGCTGAA CGATGAACGCTCGGCCAAGATCTACGACAGCTACCTGAAGATGCTCGATCCGGCGCGGATGTACTTCACCGCCGGCGACATCGCCGAGTTCGATCGCTGG CGCAACAGGTTCGACGACTTCCTCAAGAGCGGCGATCTCGATCCCGGCTTCGTCATCTACAAGCGTCACCTCGACCGCCTGAAAGGCCGTCTCGACTACG CCCTGGCGATGCTCGACAAGGGCGTCGACAAGATCGACTTCAGCGTCGACGAGAGCCTGCTGATCGACCGCGAGAAGGCCCCCTGGGCGAAGGACACCGC AGAGCTCGACGACCTCTGGCGCAAGAAGGTGAAGGACGAGGTCCTGCGCCTGAAGATCACCGGCAAGGACGACAAGGCGATCCAGGAACAGCTCACCAAG CGCTACAAGAACCAGCTGTCGCGCCTGAAGCAGACCCGCAGCGAAGACATCTTCCAGGCCTACATCAACGCCTTCGCCCAGTCCTACGATCCGCACACCC AGTACCTGTCGCCGGACAACGCGGAAAACTTCGACATCAACATGAGCCTCTCGCTGGAAGGCATCGGCGCGGTGCTGCAGAGCGACAACGACTACGTCAA GGTCGTACGCCTGGTGCCGGCCGGCCCGGCGGCGAAGAGCAAGCAGATCGCCACCTCCGACAAGATCATCGGCGTCGCCCAGGGCAAGGGCGAAATGGTC GACGTGGTCGGCTGGCGCCTGGATGAAGTGGTCAAGCTGATCCGCGGGCCGAAAGGCTCCCAGGTACGCCTGGAAGTGATTCCGGCGAGCAACGCGCCGA ACGACCAGACCAGCAAGATCGTCGCCATCACCCGCGAGGCGGTGAAGCTGGAGGACCAGGCGGCGAAGAAATCCATCATCAAGGTCGACCACGAAGGCCG CAGCTACAAGCTCGGCGTGATCGACCTGCCGGCCTTCTACCTGGACTTCAAGGCCTACCGCGCCGGCGACCCGAACTACAAGAGCACCACCCGCGACGTG AAGAAGCTGGTCGCCGAATTGCAGAAGGACAAGGTCGACGGCATCGTCCTCGACCTGCGCAACAACGGCGGCGGCTCCCTGCAGGAAGCCACCGAGCTGA CCGGCCTGTTCATCGACCAGGGCCCGACCGTACTGGTGCGCAACAGCGACGGCCGCGTCGACGTGCTCAACGACGACGAAGGCAAGGCCTTCTATACCGG CCCGCTGGCGGTGCTGGTCAACCGTCTCTCGGCCTCCGCCTCGGAGATCTTCGCCGGCGCCATGCAGGACTACCACCGCGCGCTGATCCTCGGTGGACAG ACCTTCGGCAAGGGCACCGTGCAGACCATCCAGCCGCTCAACCACGGCGAACTGAAGCTGACCCTGGCGAAGTTCTACCGTGTCTCCGGGCAGAGCACCC AGCACCAGGGCGTGATCCCGGACATCAGCTACCCGTCCATCGTCGACGACAAGGAAATCGGCGAAAGCGCCCTGCCCGACTCGATGCCCTGGGACACCAT CCGCCCGGTGGTGAAGGACGAGGCCAACCCGTTCAAGCCGTTCCTCGCGCAACTCAAGGCCCAGCACGACGCGCGCACCGAGAACAACGCCGACTTCGTC TACGCCCGCGAGCGCCTGGCGCTGGCCCAGGAGCTGATGAAGGAGAAGACCGTCAGCCTGAACGAGGCCAAGCGCCGCGCCCAGCAGACCAGCATCGAGA ACCGCCAGTTGGCCATGGAGAACGCCCTGCGCAAGTCCAAGGGCCAGGAGCCGCTGAAGGAACTCAAGCGCGAGGACGAGAACGCCCTGCCGGAAGAGGA CGACAAGACCAAGCCGCAGGACGACGCCTACCTCACCGAGTCCGGGCACATCCTGCTGGACTACCTGAACCTCAACTCGGCGGTGGCCAAGCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTCAGCGGGAGCGTCATAAAACAGTCATGGGACTGTCGTGAAATACGGGGCCGGTTGCACAACCGGCCCTTTTTCATTGCGACGAGAGCGTTCCATGAC CGTCACCGAGCAGTTGAGCGCCCTGGACAGCATCCTGGCCCACGGCGACCTGCACTGCCTGTTCCAGCCCATCCTCTCGCTTTCCGAACGGCGTCTGGTC GGCTACGAAGCGCTAACCCGCGGTCCGTCCAACAGCCCGCTGCACTCGCCCCTGGCGTTGTTCGCCGTGGCCCGCCAATGCGGACGGCTGAGCGAACTGG AACTGCTCTGCCGACAACGCGCCTTCAGCCGCTTCCGCGACATCCAGGGCGACGCCATGCTGTTCCTCAACGTCTCTCCGGAGTCCCTCCTCGAAGCCGG CCATCCGCCCGGCCGCACCCTGCAATTGCTGCAACAGCTGGGGATCTCGCCGAACCGGGTGGTGATCGAACTGACCGAACAGACCCCCATCGACGACTTC
Amino Acid Sequence
>periplasmic tail-specific protease
MKRFLPRTALLLLLGASSLPLFASTAVSVGSAQNSWDSLQPDREQVIASLNVVELLKRHHYNKPPLNDERSAKIYDSYLKMLDPARMYFTAGDIAEFDRW RNRFDDFLKSGDLDPGFVIYKRHLDRLKGRLDYALAMLDKGVDKIDFSVDESLLIDREKAPWAKDTAELDDLWRKKVKDEVLRLKITGKDDKAIQEQLTK RYKNQLSRLKQTRSEDIFQAYINAFAQSYDPHTQYLSPDNAENFDINMSLSLEGIGAVLQSDNDYVKVVRLVPAGPAAKSKQIATSDKIIGVAQGKGEMV DVVGWRLDEVVKLIRGPKGSQVRLEVIPASNAPNDQTSKIVAITREAVKLEDQAAKKSIIKVDHEGRSYKLGVIDLPAFYLDFKAYRAGDPNYKSTTRDV KKLVAELQKDKVDGIVLDLRNNGGGSLQEATELTGLFIDQGPTVLVRNSDGRVDVLNDDEGKAFYTGPLAVLVNRLSASASEIFAGAMQDYHRALILGGQ TFGKGTVQTIQPLNHGELKLTLAKFYRVSGQSTQHQGVIPDISYPSIVDDKEIGESALPDSMPWDTIRPVVKDEANPFKPFLAQLKAQHDARTENNADFV YARERLALAQELMKEKTVSLNEAKRRAQQTSIENRQLAMENALRKSKGQEPLKELKREDENALPEEDDKTKPQDDAYLTESGHILLDYLNLNSAVAKH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site