Pseudomonas aeruginosa UCBPP-PA14, PA14_21880 (tsp)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:2.30.42.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008236 serine-type peptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03572
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03572
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Alginate production ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.90.226.10:FF:000090 Tail-specific protease - - 335 564 1.3E-77
Coils Coil Coil - - 606 640 -
CDD cd00988 PDZ_CTP_protease - - 252 337 7.26059E-13
Pfam PF17804 Tail specific protease N-terminal domain IPR040573 Tail specific protease, N-terminal domain 52 239 1.9E-65
MobiDBLite mobidb-lite consensus disorder prediction - - 643 676 -
SMART SM00228 pdz_new IPR001478 PDZ domain 253 330 6.7E-5
PANTHER PTHR32060 TAIL-SPECIFIC PROTEASE - - 157 568 2.1E-75
SUPERFAMILY SSF52096 ClpP/crotonase IPR029045 ClpP/crotonase-like domain superfamily 188 549 2.15E-69
NCBIfam TIGR00225 JCVI: C-terminal processing peptidase IPR004447 C-terminal-processing peptidase S41A 210 565 1.2E-95
Gene3D G3DSA:3.90.226.10 - - - 351 542 8.2E-80
Pfam PF00595 PDZ domain IPR001478 PDZ domain 246 326 1.2E-9
SUPERFAMILY SSF50156 PDZ domain-like IPR036034 PDZ superfamily 244 328 3.84E-9
Gene3D G3DSA:2.30.42.10 - IPR036034 PDZ superfamily 253 350 8.2E-80
FunFam G3DSA:2.30.42.10:FF:000162 Tail-specific protease - - 253 350 3.2E-57
Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) IPR020992 Tail specific protease, C-terminal 549 689 6.7E-37
SMART SM00245 tsp_4 IPR005151 Tail specific protease 336 545 3.1E-56
Gene3D G3DSA:3.30.750.44 - - - 177 520 8.2E-80
FunFam G3DSA:3.30.750.44:FF:000007 Periplasmic tail-specific protease - - 176 262 2.7E-41
CDD cd07560 Peptidase_S41_CPP IPR004447 C-terminal-processing peptidase S41A 370 542 5.73243E-72
MobiDBLite mobidb-lite consensus disorder prediction - - 646 676 -
Pfam PF03572 Peptidase family S41 IPR005151 Tail specific protease 370 543 1.8E-51
Coils Coil Coil - - 195 215 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.