Pseudomonas aeruginosa UCBPP-PA14, PA14_16040 (xerD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGGTCACCATTCGGTGCACCACGGTGCCGATTTCCTTCCATTCGCTGAAATGCAGGGTCAGGCTGCCCTCGAAGAGGATCAGCGCCACTGCCAGGGATAC CAGTGGGAACAGCAGGGGGCCGAACATCTCGTCCGGATCGAGCCAGCCGAGCAGGGGGCCGGCGACGATCCCGGACAGCAGCAGGAAAAGAATGGCTGGC AGGCGCAGGCGCCAGGCCAGCCATTGACTGAGCAGGGCGGCGGCACCGATGCCGCCGAGGGCGAGCAGGATAGCGTTCTGGTCCATCGAGGATTCCTTGT CAGCGTCGCTCCGCTCGTCCTGAGCCGGGGCGAACCATCGAGCCACATGGCTCCGCTTTTTCCCGCGGGCACGGGAAGCCGGCCGACCTCCTGTCGACCG GCCTGACTAACCATTACGTGGCGATGACGGCCAACGCTCGCGATAGCGCCCAGGCTATGAAAGACTAGCCGCGCTTTCATTTGGTTCGCAGCCTTCATCC
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| DNA Sequence for Gene |
>PA14_16040
|xerD
ATGAGTACCCTCGAACATCCCCTGATCGACCGTTTCCTCGATGCCCTGTGGCTGGAAAAAGGCCTTGCCGACAACACCCGCGAGGCTTATCGCAACGACC TCCAGCAGTTCAACGCCTGGCTCGATGGCCGCGGGCTGCGCCTGGAGGGCATCGGCCGCGACGCCATCCTCGATCACCTGGCCTGGCGCCTGGAACAGGG CTACAAGGCTCGCTCGACCGCGCGCTTCCTCTCCGGCCTGCGTGGCTTCTACCGCTATTGCCTGCGCGATGGCCTGATCGCCGAGGATCCCACCTTGCAG GTGGACCTGCCGCAACTGGGCAAGCCGTTGCCGAAATCCCTCTCCGAAGCGGACGTCGAGGCATTGCTGGCGGCGCCGGAAGTCGACGACCCGCTGGGCC TGCGCGATCGCACCATGCTCGAAGTGCTGTATGCCTGCGGCCTGCGGGTCAGCGAACTGGTCGGCCTGACCCTGGAGCAGGTCAACCTGCGCCAGGGCGT GGTCAAGGTCTTCGGCAAGGGCAGCAAGGAGCGCCTGGTGCCGCTCGGCGAGGAAGCCATCGGCTGGCTCGAACGCTACCTGCGCGAGGCGCGCGGCGAC CTGCTCGGCGGGCGGCCCAGCGACGTGCTGTTCCCCAGCCTGCGCGGCGAACAGATGACCCGCCAGACCTTCTGGCATCGCATCAAGCATCACGCGCAGG TGGCGGCGATCGGTACGTCGATTTCGCCGCACACCCTGCGCCACGCCTTCGCCACCCACCTGCTCAACCATGGCGCCGACCTGCGGGTGGTGCAGATGCT GCTCGGCCACAGCGACCTGTCGACCACCCAGATCTATACCCATATCGCCCGGGCCCGCCTCCAGGATCTGCACGCACGCCACCACCCGCGAGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCTTTGTCCGAAAAATCCGTACCTACCCGAAAAGAGGCGCTTTCGTAGCGTTCTGCGACAAGCGTCGGGCCCGTCGGGATAGCGGTCTATGGTAGGCTT CGCCGACCGCACGACAGGAGTGACACATGCGCGTGACCCGTTTTCTGGCTGCTGCCGCCCTCGGCCTGATGAGTACCCTGGCCCTGGCAGACAATGCCGA TCAGAACATCCGCAAGACCCTGCAGGCCCTGCAACCGGACCTGCCCATCGACTCCATCGCCAGCAGCCCGCTGCAGGGGCTCTACCAGGTGCAGCTGAAG GGCGGCCGGGTGCTCTACGCCAGCGCCGACGGCCAGTTCGTCATGCAGGGCTACCTCTACCAGGTGAAGGACGGCAAGCCGGTCAACCTGACCGAGAAGG CCGAGAGCCAGGCGATCGCCAAGGCGATCAACGGCGTGCCCGCCAGCGAGATGGTGGTGTATCCGGCCAAGGGCCAGGCCAAGGCGCACATCACGGTGTT
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| Amino Acid Sequence |
>site-specific tyrosine recombinase XerD
MSTLEHPLIDRFLDALWLEKGLADNTREAYRNDLQQFNAWLDGRGLRLEGIGRDAILDHLAWRLEQGYKARSTARFLSGLRGFYRYCLRDGLIAEDPTLQ VDLPQLGKPLPKSLSEADVEALLAAPEVDDPLGLRDRTMLEVLYACGLRVSELVGLTLEQVNLRQGVVKVFGKGSKERLVPLGEEAIGWLERYLREARGD LLGGRPSDVLFPSLRGEQMTRQTFWHRIKHHAQVAAIGTSISPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHIARARLQDLHARHHPRG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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