Pseudomonas aeruginosa UCBPP-PA14, PA14_15720
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGTACAGCCCGGTAACGGCAGGTACGTGCTGGGTCAGTTGCTCGAGCAGTTTGCCGTGGCGGAAAGCGGAAAGGGCGGGAGCGCCGCGCAGGATCAGCAT TGTCGGAACAGCCTCTGGAGACGGGAAGGTGTGGGGGCCGGCCGGGCCGGCCCGCAGAGGCCGTGCATTCTACCGTAAAGCACCGTCCGGCGGCACCCGC GCCGATGGCTATCGCATAGCCCTCCATCGGATCCGCGGCGGCCCGCTTCGAAGCACTTCGAGAACGGCGCCGCAGCGCTCTGCGACGGGGCAAGCGAAAC GGCGGACGAACGGTATCCCGGCGATAGCAGAGAAGGTCCCGGCTGTCGAGATATGGCGCCGTCTCGCCTTTGCGTATACTGCGCCGATGTTTGCCCTGAC CGCGTACCGCTTACGTTGCGCCGCCTGGCTGTTGGCGACCGGCATCTTTCTGCTGCTTGCGGGCTGTAGCGAGGCGAAAGCCCCTACCGCCCTGGAGCGC
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| DNA Sequence for Gene |
>PA14_15720
GTGCAGAAGGAGGGCGTACTGCGCGTGATCACCCGCAACAGCCCGGCCACCTACTTCCAGGACCGCAACGGCGAAACCGGCTTCGAATACGAACTGGCCA AGCGCTTCGCCGAGCGTCTCGGCGTCGAGCTGAAGATCGAGACCGCCGACAACCTCGACGACCTCTATGCCCAGCTTTCCCGCGAGGGCGGCCCGGCGCT CGCCGCGGCCGGCCTGACCCCGGGACGCGAAGACGACGCCAGCGTGCGCTACTCGCACACCTACCTCGACGTCACCCCGCAGATAATCTACCGCAACGGC CAGCAGCGCCCGACCCGCCCGGAAGACCTGGTCGGCAAGCGCATCATGGTGCTCAAGGGCAGCAGCCACGCGGAGCAGCTCGCCGAGCTGAAGAAGCAGT ATCCCGAACTGAAGTACGAAGAATCCGATGCTGTCGAAGTGGTCGACCTGTTGCGCATGGTCGACGTCGGCGACATCGACCTGACCCTGGTCGACTCCAA CGAACTGGCGATGAACCAGGTGTACTTCCCCAACGTCCGCGTCGCCTTCGACTTCGGCGAAGCCCGCGGGCTGGCCTGGGCCTTGCCGGGGGGCGACGAC AGCCTGATGAACGAGGTCAACGCGTTCCTCGACCAGGCCAAGAAGGAAGGGCTGCTGCAACGCCTGAAGGACCGTTACTACGGGCATGTCGACGTACTCG GCTACGTCGGCGCCTACACCTTCGCCCAGCACCTGCAGCAACGCCTGCCGCGCTACGAAAGCCACTTCAAGCAGAGCGGCAAGCAGTTGGATACCGACTG GCGCCTGCTCGCCGCCATCGGCTACCAGGAATCGCTGTGGCAGCCCGGCGCCACCTCCAAGACCGGCGTGCGCGGCCTGATGATGCTGACCAACCGCACC GCCCAGGCGATGGGGGTGTCCAACCGGCTCGACCCGAAGCAGAGCATCCAGGGCGGCAGCAAGTATTTCGTGCAGATCCGCAGCGAACTGCCCGAGAGCA TCAAGGAACCGGACCGCAGCTGGTTCGCCCTGGCCGCCTACAACATCGGCGGCGCGCACCTGGAAGACGCGCGCAAGATGGCCGAGAAGGAAGGCCTCAA CCCGAACAAGTGGCTGGACGTGAAGAAGATGCTGCCGCGCCTGGCGCAGAAGCAGTGGTACGCCAAGACCCGCTACGGCTATGCGCGCGGCGGCGAGACC GTGCACTTCGTACAGAACGTGCGGCGCTACTACGACATCCTCACCTGGGTGACCCAGCCGCAGATGGAAGGCAGCCAGATCGCCGAGAGCGGGTTGCACC TGCCCGGCGTGAACAAGACGCGCCCGGAAGAAGACAGCGGCGACGAGAAACTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGCCCCCTCCCCTCAGGATTCTCCGTCGCTTGCCAGCCAGGCGGCGTGCTCGCGCACATCGGTCGGCCAGCCGGCGATCCGCTCGGCGAAGCCCTCGCG ATCCCCGGCGAACAGCGCCCGCGTCGCCTCCTCGAAGCCCGGCAGGTCGCCGGCCATCGCATTCATGAAATGGTAGGCGCGCTCTTGCGCCTGCCGCGCA CGCCCGGACTGGCTGCGGCGCGCCTCCTCGACCAGCTTGCGCAGCGCCACCGAGGCGCCCCCGGGCTGCGCGGCGAGCCATTCCCAGTGGCGCGGCAGCA AGGTCACCTCGCGCGCCACCACGCCCAGCTTCGGCCGCCCGCGCCCGCGCGGCGCGGCCTCCTCCGCCGGTTGCCGCTCGCCTGCGCCGACCAGGCGCGC CAGCAGGTCCTCGCGGGAACCGCGGATATCGAGATCGACGGAGCGCCCAGTGGCATTGTCGAACACCAGCAGCGGCCCGGCAGCACCGCCGGCGACCGCT
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| Amino Acid Sequence |
>transglycosylase
MQKEGVLRVITRNSPATYFQDRNGETGFEYELAKRFAERLGVELKIETADNLDDLYAQLSREGGPALAAAGLTPGREDDASVRYSHTYLDVTPQIIYRNG QQRPTRPEDLVGKRIMVLKGSSHAEQLAELKKQYPELKYEESDAVEVVDLLRMVDVGDIDLTLVDSNELAMNQVYFPNVRVAFDFGEARGLAWALPGGDD SLMNEVNAFLDQAKKEGLLQRLKDRYYGHVDVLGYVGAYTFAQHLQQRLPRYESHFKQSGKQLDTDWRLLAAIGYQESLWQPGATSKTGVRGLMMLTNRT AQAMGVSNRLDPKQSIQGGSKYFVQIRSELPESIKEPDRSWFALAAYNIGGAHLEDARKMAEKEGLNPNKWLDVKKMLPRLAQKQWYAKTRYGYARGGET VHFVQNVRRYYDILTWVTQPQMEGSQIAESGLHLPGVNKTRPEEDSGDEKL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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