Pseudomonas aeruginosa UCBPP-PA14, PA14_15720

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_02016
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR35936 MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE F - - 245 364 2.7E-48
SUPERFAMILY SSF53955 Lysozyme-like IPR023346 Lysozyme-like domain superfamily 207 414 7.99E-33
Gene3D G3DSA:3.40.190.10 - - - 2 224 2.4E-87
CDD cd01009 PBP2_YfhD_N - - 5 228 3.33636E-98
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 8 229 1.5E-28
Gene3D G3DSA:1.10.530.10 - - - 235 417 3.3E-36
MobiDBLite mobidb-lite consensus disorder prediction - - 428 451 -
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 7 229 4.75E-38
Pfam PF01464 Transglycosylase SLT domain IPR008258 Transglycosylase SLT domain 1 256 363 5.0E-20
Gene3D G3DSA:3.40.190.10 - - - 92 187 2.4E-87
SMART SM00062 AABind_6 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 6 230 8.5E-32
CDD cd13403 MLTF-like - - 256 416 8.74337E-86
Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. IPR023703 Membrane-bound lytic murein transglycosylase F 1 450 43.023655

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.