Pseudomonas syringae pv. syringae B728a, Psyr_4239

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. syringae B728a chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
ATGCTTCAGTCGGACATGGCCAAGGTCGGGATCAAGATAGACATTCGCATCATGGAATGGGGCGAAATGCTCAAGCGCGCCAAAAATGGCGAACACGACA TGGTTTTTGCCGGATGGGCTGGCGACAATGGCGACCCGGATAACTTCCTCACGCCCAACCTGAGCTGTGACGCGGCCAAAAATGGCGAGAACTATGCCCG CTGGTGCAACAACGCGTTCGAGGACGCAATCACTCAAGCACGAAAAATAACCGAACCGGCGGAACGTGCCGCCCTCTATAAGCAGGCTCAACAAGTGTTC AATCAAGAACAGCCCTGGATCAGCCTGGCTTACCCGAAACTTTTCGTTGCAATGCGCAAAGATGTCGAAGGCTTTAAAATAAGCCCTTTGACCAATAACA ACTTCGCCACTACCCAGGTGAAGTAGAAAAATAATCCGGCGAGCTCATAACCCGAGACTCGCCGGAGCACGCCTAACCGGCTGATGAGGTACACACCAAG
DNA Sequence for Gene
>Psyr_4239
ATGTTTAGTTTTATCGCCCGCCGAGTGGGGTTGCTGATACCCACTTTCTTCGGCATCACCTTATTGACCTTCGCCCTGATTCGTCTGATTCCGGGCGATC CGGTCGAAGTCATGATGGGTGAGCGCCGTGTCGATCCGGAAATGCACGCTCAGGCCATGGAGCGTCTGGGTCTGAACAAACCCCTCTACGCCCAGTACAT CGATTACATCGGCAAGCTCGCCCAGGGCGACCTCGGTGAATCGCTGCGTACGCGCACCAGTGTCTGGTCCGAATTCACTTCGCTGTTCCCGGCAACCCTG GAGTTGTCGCTGGCGGCGCTGATTTTCGCGGGTATTCTCGGCCTGCTGGCCGGGGTGATCGCCGCACTCAAGCGAGGGTCCCTGTTCGACCATGGGGTCA TGGGGATTTCCCTCGCCGGTTATTCCATGCCGATCTTCTGGTGGGGCCTGATCCTCATCATGTTCTTCTCGGTAACGCTGGGCTGGACCCCGGTTTCCGG GCGCATCGACCTGCTGTACGACATTCCGCCGGTCACCGGCTTCATGCTGATCGACACGCTGCTCAGTGACGAACAGGGTTCGTTCCTCGATGCCCTGCAC CACATGATTCTGCCGGCCATCGTACTGGGCACCATCCCGCTCGCGGTGATCGCCCGGATGACTCGCTCGTCGATGCTCGAAGTGCTGCGTGAAGACTACG TGCGTACCGCCAGAGCCAAAGGCCTGTCGCCTGCCCGTGTGGTATTCGTTCATGGCCTGCGCAATGCGCTGATTCCGGTACTGACCGTGTTCGGTCTGCA AATCGGTACCTTGCTGGCCGGTGCGGTACTGACCGAAACGATCTTCTCCTGGCCGGGTATCGGCAAGTGGTTGATCGAAGCCATTGGCGCCCGGGACTAC CCGGTCGTGCAAAACGGCATTCTGCTGATCGCCTGTCTGGTGATCCTGGTCAATTTCGTGGTGGATATCCTCTACGGCTTTGCCAACCCACGCATTCGTC ACCAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GATCATCGATATGAGCACCCCTACTCCTGCGGTAGCAGTCGATCAAAGCCTGCTTTACCCATCCCCGTACAAAGAATTCTGGCAAGCCTTCTCGAAAAAC AAAGGCGCGGTTGCCGGCCTGCTGTTCATGATCCTGATCGTGTTCTGCGCCCTGTTCGCGCCCTGGGTTGCACCCCATGACCCGAGCGAGCAATACCGCG ACTTCCTGCTGACGCCTCCGGTGTGGCTCGAAGGCGGCCAATGGCAATTCATCCTCGGTACCGACGAACTGGGCCGCGATCTGCTGTCACGTCTGATCCA GGGTTCGCGCCTGTCGCTGCTGATCGGTCTGGCATCGGTGGTCATGTCGCTGATCCCCGGCATTCTGCTGGGCCTGCTGGCGGGCTTCTTCCCTCGCGTG CTCGGCCCTTCGGTGATGCGCCTGATGGACATCATGCTCGCCCTGCCTTCGCTGCTGCTGGCTGTGGCCATCGTGGCGATCCTCGGCCCAGGCCTGATCA
Amino Acid Sequence
>binding-protein dependent transport system inner membrane protein
MFSFIARRVGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQAMERLGLNKPLYAQYIDYIGKLAQGDLGESLRTRTSVWSEFTSLFPATL ELSLAALIFAGILGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVTLGWTPVSGRIDLLYDIPPVTGFMLIDTLLSDEQGSFLDALH HMILPAIVLGTIPLAVIARMTRSSMLEVLREDYVRTARAKGLSPARVVFVHGLRNALIPVLTVFGLQIGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY PVVQNGILLIACLVILVNFVVDILYGFANPRIRHQR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site