Pseudomonas syringae pv. syringae B728a, Psyr_4239

Gene Feature Overview

Strain	Pseudomonas syringae pv. syringae B728a (Feil et al., 2005) GCF_000012245.1|latest
Locus Tag	Psyr_4239
Name
Replicon	chromosome
Genomic location	5051620 - 5052630 (+ strand)

Cross-References

RefSeq	YP_237307.1
GI	66047466
Entrez	3369779
INSDC	AAY39269.1
NCBI Locus Tag	Psyr_4239
UniParc	UPI000050DAC1
UniProtKB Acc	Q4ZNK3
UniProtKB ID	Q4ZNK3_PSEU2
UniRef100	UniRef100_Q4ZNK3
UniRef50	UniRef50_P0AEG0
UniRef90	UniRef90_G8Q990

Product

Feature Type	CDS
Coding Frame	1
Product Name	binding-protein dependent transport system inner membrane protein
Synonyms
Evidence for Translation
Charge (pH 7)	2.40
Kyte-Doolittle Hydrophobicity Value	0.701
Molecular Weight (kDa)	37.0
Isoelectric Point (pI)	8.44

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 582 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004090 (513 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Psyr_4239 Search term: binding-protein dependent transport system inner membrane protein

Human Homologs

References