Pseudomonas syringae pv. syringae B728a, Psyr_3680
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B728a chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAGCAGCTCGGCGTTCGGTATGCTCGCCCGGGCCATGGGCCACGACATGCAGTGTGGCGTGGTGCAGTTCATCAAGGGCCGCAACAGCACGGGCGAAGAA ATGTTTTTCCGCCGTTTCCCCGAGCAGGTGCGCTATCACGTGATGGGCGAGGGCTTCACCTGGGAAACCCAGGATCGCCAGCGTGACATCGCCGCCGCTG AGGCCGCCTGGGCCGTGTCTCAGGAAATGCTTCGCGATCCGGCCATTGGTCTGGTGGTGCTCGACGAACTGAATATCGCCCTCAAACATGGCTACCTCGA CCTCGAACAGGTGCTGAGCGATCTGCAGGCACGTCCGCCGATGCAGCACGTATTGGTGACTGGCCGCGGTGCCAAAGCCGAATTGATCGACCTGGCCGAT ACTGTTTCCGAGATCGGCGTGGTCAAGCACGCGTTTCAGGCCGGTATTCGTGCGCAGAAAGGTATCGAGCTGTGAACCCTTCATCATTGAGCGCATTGCA
|
|
| DNA Sequence for Gene |
>Psyr_3680
ATGAGAGCCCCGCGTGATTGCCCGGCGGTACTGATCGCTGCGCCTGCCTCCGGGCAAGGCAAAACCACGGTGACCGCTGCACTGGCACGCCTGCACCGCA ACCAGGGGCACAAGGTCCGGGTGTTCAAGTGCGGCCCGGACTTTCTCGACCCGATGATTCTCGAGCGGGCCAGTGGCGCGCCGGTCTATCAACTCGACAT GTGGATGGTCGGTGCCGATGAAAGCCGTCGCCTGTTGTGGGAAGCGGCTGACGAGGCCGACCTGATTCTGATCGAAGGGGTCATGGGCCTGTTCGATGGC ACGCCGTCGAGCGCCGACCTGGCCCGGCATTTTGGCGTGCCGGTACTCGGTGTGATCGACGGCACGGCCATGGCGCAGACGTTTGGCGCACTGGCGCTGG GCCTGGCGCGCTATCAGCCTGATCTGCCGTTCGCCGGCGTGCTGGCCAATCGCGTCGGCACGGTACGCCATGCGCAGTTGCTGGAGAACAGCCTGACCGA AGGCCTGCGCTGGTACGGCGCCCTGTCCCGGGAGGTCGGCTTCGAATTGCCCAGCCGCCATCTGGGGCTGGTCCAGGCCAGTGAGCTCAATGATCTGGAC GTGCGTCTGGACATGGCGGCTGCGGCGCTGGCCAGCACCTGCGAAGTGGCCTTGCCGCCGGCCGTGACCTTTACTGCGCCCGACCCGGTGCAGGTCGAGC CGCTGCTGCGCGGCATCCGCATCGCCATCGCGCGCGACGAAGCCTTTGCCTTTCTGTATGGCGCGAGCCTGGACCTGCTGAGGAACATGGGCGCCGAACT GAGCTTCTTCTCGCCGATCCATGATCGCGAGCTGCCCGACGCCGACAGCCTGTACCTGCCAGGCGGCTACCCGGAGCTGCACCACGTCGCGCTGGCCGCC AATGGCACGATGCAGGCTTCGATCAGGGCTCACCATATTGCCGGCAAGCCGATTCTCGCCGAGTGCGGCGGCATGCTCTATTTGCTCGAAGCCTTGACCG ATGTCGAGGGCGTGCGCGCCGAACTGGTCGGCTTGCTGTCCGGTGAAGCGGTCATGCAGAAGCGTCTGGCCGCGCTGGCCTTGCAAGCCGTCGAGCTGCC CGAGGGCACGCTGCACGGTCACACTTATCACCATTCGCTGACCAGCACCGAGCTGCAGCCGATTGCGCGTGGCGTCAGCCCCAATGGCGGGCGCGGCGCA GAAGCGGTCTATCGCCTGGGTCGCCTGACCGCGTCCTACGTGCATTTCTATTTTCCTTCCTGCCCTCAGGCGATCGCGGCGCTGTTCAAACCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGAGCAAGCGTTCAGCCCCGAAGAGCGGGCTGCGGTGTACCGCGCCATCGCCGAACGTCGCGACATGCGCCACTTCATCGGCGGCACGGTCGCGCCCGA GCTGCTGGCACGTGTGCTGGAGGCCGCGCATCAGGCCCCCAGCGTCGGGCTGATGCAACCGTGGCGCTTCATCCGCATCAGCGACCCGCTATTGCGCGGC AGGATGCAGGCGCAGGTAGAGCAAGAGCGTATCCGGACCGCCGAGGCGCTGGGTGAGCGCACCGACGAATTCATGAAGCTCAAGGTCGAAGGCATCAACG ACTGTGCAGAAGTGCTGGTCGCCGCGCTGATGGAAGGGCGTGAGCAACACATTTTCGGCCGGCGCACCTTGCCGGAAATGGACATGGCTTCGCTGTCCTG CGCGATCCAGAACCTGTGGCTGGCCTCGCGTGCAGAAGGCCTGGGCATGGGCTGGGTGTCGCTGTTCGACCCCGAGGCGCTGGCCGAACTGCTGGGCATG
|
|
| Amino Acid Sequence |
>cobyrinic acid a,c-diamide synthase
MRAPRDCPAVLIAAPASGQGKTTVTAALARLHRNQGHKVRVFKCGPDFLDPMILERASGAPVYQLDMWMVGADESRRLLWEAADEADLILIEGVMGLFDG TPSSADLARHFGVPVLGVIDGTAMAQTFGALALGLARYQPDLPFAGVLANRVGTVRHAQLLENSLTEGLRWYGALSREVGFELPSRHLGLVQASELNDLD VRLDMAAAALASTCEVALPPAVTFTAPDPVQVEPLLRGIRIAIARDEAFAFLYGASLDLLRNMGAELSFFSPIHDRELPDADSLYLPGGYPELHHVALAA NGTMQASIRAHHIAGKPILAECGGMLYLLEALTDVEGVRAELVGLLSGEAVMQKRLAALALQAVELPEGTLHGHTYHHSLTSTELQPIARGVSPNGGRGA EAVYRLGRLTASYVHFYFPSCPQAIAALFKP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|