Pseudomonas syringae pv. syringae B728a, Psyr_3680

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0042242 cobyrinic acid a,c-diamide synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00027
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07685
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psb01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psb00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52317 Class I glutamine amidotransferase-like IPR029062 Class I glutamine amidotransferase-like 239 429 1.44E-27
Gene3D G3DSA:3.40.50.880 - IPR029062 Class I glutamine amidotransferase-like 247 416 1.4E-8
Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain IPR011698 CobB/CobQ-like glutamine amidotransferase 240 418 4.3E-31
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 46 178 1.7E-10
CDD cd05388 CobB_N - - 8 192 4.2037E-80
PANTHER PTHR43873 COBYRINATE A,C-DIAMIDE SYNTHASE IPR004484 Cobyrinic acid a,c-diamide synthase CbiA 8 429 4.8E-115
CDD cd03130 GATase1_CobB - - 241 429 7.23379E-72
Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain 10 188 1.5E-13
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 9 194 2.76E-38
Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. IPR004484 Cobyrinic acid a,c-diamide synthase CbiA 7 422 36.60862

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.