Pseudomonas simiae WCS417, PS417_RS04365 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain WCS417. [Details]
DNA Sequence Upstream of Gene
GCGACTACGCCATCCAGGCGATCAAGGACGTACTGGAAACCGAGATTCCGGTCTTCGGTATCTGCCTTGGTCACCAGCTGCTGGCCCTGGCCTCCGGCGC CAAGACCCTGAAAATGGGTCACGGCCACCACGGTGCCAATCACCCGGTTCAAGACCTGGACACTGGCGTTGTGATGATCACCAGCCAGAACCACGGTTTT GCGGTAGATGAAGCAACCCTGCCGAGCAACGTGCGCGCCATTCACAAGTCGCTGTTCGACGGTTCCCTGCAGGGCATCGAGCGCACCGACAAGAGCGCGT TCAGCTTCCAGGGCCACCCTGAAGCGAGCCCGGGCCCGAACGACGTAGCGCCGCTGTTCGACCGTTTCATCAATGAGATGGCCAAGCGACGCTGACTGAG CGGCCTGCGGGCGGCCCCGGACACCGGTGGCCCCCGCAGGCTCATCAAAGATTGTTCAAGACGGCTTGCCGACTGACCTGCGGATTTGAGTGACAAACCC
DNA Sequence for Gene
>PS417_RS04365 |carB
ATGCCAAAACGTACAGACATAAAAAGCATCCTGATTCTCGGCGCTGGCCCGATCGTGATCGGCCAGGCCTGCGAATTCGACTACTCCGGCGCCCAGGCCT GTAAAGCCCTGCGCGAAGAGGGCTACCGCGTCATTCTGGTGAACTCCAACCCGGCCACCATCATGACCGACCCGGCCATGGCCGACGCCACTTACATCGA GCCGATCAAGTGGCAGACCGTTGCCAAGATCATCGAGAAAGAGCGTCCAGATGCGCTGCTGCCAACCATGGGCGGCCAGACTGCACTGAACTGCGCCCTG GACCTGGAGCGCGAAGGCGTCCTGGAAAAATTCGGCGTAGAGATGATCGGCGCCAATGCCGACACCATCGACAAGGCTGAAGACCGTTCGCGTTTCGACA AGGCCATGAAGTCCATCGGCCTGGCCTGCCCGCGTTCCGGTATCGCCCACAGCATGGAAGAAGCCAACGCGGTCCTTGAGACCCTGGGCTTCCCGTGCAT CATCCGTCCGTCCTTCACCATGGGCGGCACCGGTGGCGGTATCGCTTACAACCGTGAAGAGTTCGAAGAAATCTGCGCCCGTGGCCTGGACCTGTCGCCG ACCAAAGAGCTGCTGATCGACGAATCCCTGATCGGCTGGAAAGAATATGAGATGGAGGTTGTCCGCGATAAGAAGGACAACTGCATCATCGTCTGCTCCA TCGAAAACTTTGACCCGATGGGTGTGCACACCGGTGACTCGATCACTGTTGCTCCTGCACAGACCCTGACCGACAAGGAATACCAGATCCTGCGTAACGC CTCCCTGGCGGTACTGCGCGAGATTGGCGTGGAAACCGGCGGTTCCAACGTTCAGTTCGGCATCTGCCCGAACACCGGCCGCATGGTCGTGATCGAAATG AACCCACGCGTTTCCCGTTCGTCGGCCCTGGCTTCGAAAGCCACCGGCTTCCCGATCGCCAAGGTCGCGGCCAAGCTGGCAGTGGGTTACACCCTGGACG AATTGTCGAACGACATCACCGGCGGCAAGACCCCGGCGTCCTTCGAGCCGTCCATCGACTACGTCGTGACCAAGCTGCCACGTTTTGCCTTCGAGAAATT CGCCAAGGCTGACGCACGCCTGACCACCCAGATGAAGTCGGTGGGTGAAGTGATGGCCATCGGCCGTACCTTCCAAGAGTCTCTGCAGAAAGCCCTGCGC GGCCTGGAAGTGGGCGTTTGCGGTCTGGACGAGAAGCTCGACCTGAGCAACCCGGAAAGCATGAGCGTGCTCAAGCGCGAGCTGACCGTGCCGGGCGCCG AGCGTATCTGGTACGTGGCTGACGCCTTCCGCGCCGGCATGACCGTCGAAGACATCTTCGGCATGAACATGATCGACCCGTGGTTCCTGGTACAGATCGA AGACCTGATCAAGGAAGAAGAGAAGGTCAAGACCCTGGGTCTGGCCAGCATCGACCGCGACATGATGTTCCGCCTCAAGCGCAAGGGCTTCTCCGATCAG CGTCTGGCCAAGCTGCTGGGTGTGACCGAGAAGAACCTGCGTACGCATCGCCACAAGCTGGAAATCTTCCCGGTCTACAAGCGCGTTGACACCTGCGCGG CCGAGTTCTCCACCGACACCGCCTACCTGTACTCCACCTATGAGGAAGAGTGCGAAGCCGCGCCGTCGGGTCGCGACAAGATCATGATCCTGGGTGGCGG TCCAAACCGTATCGGCCAGGGTATCGAGTTCGACTACTGCTGCGTCCACGCCGCCCTCGCTCTGCGCGAAGATGGCTATGAGACCATCATGGTCAACTGC AACCCGGAAACCGTTTCCACCGACTACGACACCTCCGATCGCCTGTACTTCGAACCAGTGACCCTGGAAGACGTGCTGGAAATCGTGCGCGTCGAGAAGC CCAAAGGCGTGATCGTGCAGTACGGCGGTCAAACTCCGCTGAAACTGGCGCGCGCCCTGGAAGCCGCTGGCGTGCCGATCATCGGTACCAGCCCTGACGC CATCGACCGTGCCGAAGACCGCGAGCGTTTCCAGCAAATGGTAGAGCGCCTGAACCTGCGTCAGCCGCCAAACGCCACCGTGCGCAGCGAAGACGAGGCC ATCCGTGCCGCCAGCAAGATTGGCTATCCACTGGTGGTGCGTCCGTCCTACGTACTGGGCGGCCGTGCGATGGAAATCGTCTACGAAGAAGAAGAACTCA AGCGTTACCTGCGCGATGCGGTGAAAGTGTCCAATGACAGCCCGGTGCTGCTTGACCACTTCCTCAACTGCGCAATCGAGATGGACGTGGACGCTGTTTG CGACGGCACCGACGTGGTGATCGGCGCGATCATGCAGCACATCGAGCAGGCGGGTGTTCACTCGGGTGACTCCGCATGCTCCCTGCCGCCGTACTCGCTG CCGGCGCACATCCAGGACGAGATGCGCGAACAGGTCAAGAAAATGGCCCTGGAGCTGGGCGTGGTCGGCCTGATGAACGTACAGTTGGCGCTGCAAGGCG AAGACATCTACGTCATTGAAGTCAACCCGCGCGCTTCGCGCACCGTGCCATTTGTTTCCAAGTGCATCGGTGTGTCCCTGGCCATGATCGCTGCTCGCGT GATGGCCGGTAAGACCCTGAAGGAAATCGGCTTCACCAAGGAAATCATTCCTAACTTCTACAGCGTGAAAGAGGCGGTGTTCCCATTCGCCAAATTCCCT GGCGTGGACCCGATCCTGGGCCCAGAGATGAAGTCCACCGGTGAAGTGATGGGCGTTGGCGATACCTTCGGTGAAGCCTTCGCCAAGGCCCAGATGGGCG CCAGCGAAGTGTTGCCGACCGGCGGTACTGCGTTCATCAGCGTGCGTGATGATGACAAGCCGCTGGTTGCAGGCGTGGCCCGTGATCTGATCAACTTGGG CTTCGAAGTCGTGGCCACTGCCGGGACCGCCAAGCTGATCGAAGCTGCCGGCCTGAAAGTGCGTCGCGTGAACAAGGTGACGGAAGGCCGTCCACACGTG GTCGACATGATCAAGAATGACGAAGTCACCCTGATCATCAACACCACCGAAGGTCGCCAGTCGATCGCGGATTCCTACTCCATTCGTCGTAACGCCTTGC AGCACAAGATTTACTGCACCACTACCATTGCTGCTGGCGAAGCCATCTGCGAAGCGCTCAAATTCGGTCCGGAAAAGACCGTGCGTCGCTTGCAGGATCT ACACGCAGGATTGAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCAAATACCCAATGACTGTCCAGGGCTTCAAGGCCCTGGAAGAGGAGCACGCCCATCTGACCAAGGTCGTACGTCCAAAGCTGAGCCAGGACATCGGTAC GGCCCGTGAGCTGGGTGACTTGAAGGAAAACGCTGAATACCACGCTGCTCGTGAGCAGCAAGGTATGGTCGAGGCGCGGATCCGTGATATCGAAGGCCGC CTGCAGAACTCGGTGGTCATCGACGTGACGACCATTCCAAAGACCGGCAAGGTGATTTTCGGCACTACCGTGGAAATCGCTAATGTTGAGACTGACGAAA GCGTGGTCTACCACATCGTTGGCGAAGATGAAGCTGACTTCAAACTCGGCAAAATCTCTGTCGGTTCTCCGCTCGCCCGCGCCTTGATTGCCAAGGAAGA GGGCGATGTGGTGTCTGTTAAAACGCCTGGCGGCGTGACCGAGTACGAGATTGTTGAAGTTCGTCACGTCTGAAAGGCGGCGCCCGCTTCGTGCGGGCGC
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCAL DLEREGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLETLGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPRFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGVCGLDEKLDLSNPESMSVLKRELTVPGAERIWYVADAFRAGMTVEDIFGMNMIDPWFLVQIEDLIKEEEKVKTLGLASIDRDMMFRLKRKGFSDQ RLAKLLGVTEKNLRTHRHKLEIFPVYKRVDTCAAEFSTDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEA IRAASKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSL PAHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site