Pseudomonas simiae WCS417, PS417_RS04365 (carB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas simiae WCS417
GCF_000698265.1|latest |
| Locus Tag |
PS417_RS04365
|
| NCBI Old Locus Tag | PS417_24040 |
| Name |
carB
Synonym: PS417_24040 |
| Replicon | chromosome |
| Genomic location | 5202937 - 5206158 (- strand) |
Cross-References
| RefSeq | WP_010206612.1 |
| GI | 497892456 |
| EC Number | 6.3.5.5 |
| NCBI Locus Tag | PS417_RS04365 |
| NCBI Old Locus Tag | PS417_24040 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
carbamoyl phosphate synthase large subunit
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -28.65 |
| Kyte-Doolittle Hydrophobicity Value | -0.086 |
| Molecular Weight (kDa) | 117.4 |
| Isoelectric Point (pI) | 4.87 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004401 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PS417_RS04365
Search term: carB
Search term: carbamoyl phosphate synthase large subunit
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value:
3.5e-228
Percent Identity:
40.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value:
3.5e-228
Percent Identity:
40.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value:
3.5e-228
Percent Identity:
40.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value:
3.5e-228
Percent Identity:
40.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value:
3.5e-228
Percent Identity:
40.7
|
References
No references are associated with this feature.