Pseudomonas simiae WCS417, PS417_RS14275

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas simiae strain WCS417. [Details]
DNA Sequence Upstream of Gene
CCGCGTCTCGACCGCCTGGACTCCGCGCGCATCGGCAGCTCCCGTGCGATCACCCAACTGATCCTGAACCTGGTGGAAGGTACGCCGATCCGTCTGTTCG ACGGTGGTGAGCAGAAACGTTGCTTCACTGACATCGCCGACGGTATCGAAGCCCTGGCGCGCATCATTGATAACGACAACGACGCGTGCAACGGCCAGAT CATCAACATCGGCAACCCGGAAAATGAAGCCAGCATCCGCCAATTGGGCGAAGAGCTGCTGCGCCAGTTCGAAGCGCACCCGCTGCGTGGCAACTTCCCG CCGTTCGCCGGTTTCCGTGACGTGGAAAGCAAGGCGTTCTACGGCACCGGTTACCAGGACGTGGCACATCGCAAGCCAAGCATCGAAAACGCCAAGCGCC TGCTGAACTGGGAGCCGACCGTAGAGATGAGTGAAACCATCGGCAACACTCTGGATTTCTTCTTGCGTGAAGCGATGCTCGAAATCGCGGACAAAAAGTA
DNA Sequence for Gene
>PS417_RS14275
ATGGATGCAGGTCTTCGCATCGACGTCGACACCTACCGCGGCACCCGTGAAGGTGTGCCACGGTTGCTCGAATCCCTGGACGAAGCCTCGGTAAAAGCGA CGTTTTTCTTCAGTGTCGGGCCGGACAACATGGGGCGCCACCTGTGGCGCCTCATCCGGCCGCAGTTCCTGTGGAAGATGCTGCGTTCCAACGCCGTCGG GCTGTATGGCCTGGATATCCTGCTGGCTGGTACAGCCTGGCCAGGCAAGCCGATCGGTCGCGACCTGGGGCACCTGATGCGCCAAGCCAAGGCGGCCGGG CATGAGGTCGGCCTGCACGCCTGGGATCACCACGGCTGGCAGGCCAACACCGGGCGCTGGAGCGAAGCGCAGTTGGTCGAGCAAATTCGACGCGGCGTGG AGAGCCTGAGCGACATCCTTGGTGAGCGCATTGACTGTTCAGCGGCCGCCGGTTGGCGCGCCGATGAACGCGTCGTGCAAGCCAAGCAAGGGTTCAACTT TCGCTACAACAGCGATTGCCGCGGCACTAGCCTGTTTCGTCCCACCTTGGCCGATGGCAGTGCGGGTACCCCACAGATTCCGGTGGACCTGCCGACCTTC GACGAAGTCGTCGGGCCGGTAGTGGCTGCCAAGGACTTCAATACGTTCATCCTCGACCGCTTTGCCGAGTCGAAGCTCAACGTCTACACGATCCACGCAG AGGTAGAAGGGATTCTGATGGCCAATGAGTTCCGCCAGTTGCTCGCCCAGGCAGGGCAGCGCGGCATCGATTTCAAACCGTTGGGCGAGTTGTTGCCGGC GGACCTGACCACCCTGCCCCAGCAACAGCTGGTGCGCGGCGTCTTGCCCGGTCGCGAGGGTTGGCTTGGAGTGCAGCAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCGCCGTTGGGCCCTGCCCCTGCTCCTGCTGGCGTTTGGCGTGTTTTACCTGCTGCCACTGGCTACCCATGGTCTGTGGATTCCGGATGAAACCCGTTA TGCGCAAATCAGCCAGGAAATGCTGCTGACCGGAAAATGGGCGTCGCCGCACTTCATGGGTATCCGTTACTTCGAGAAACCGGCGGCCGGTTACTGGATG ATCGCGCTGGGCCAGGCGATCTTCGGGCAGAACCTGTTCGGCGTGCGGTTTGCGTCGGCGTTGAGCACCGGATTGAGCATCCTGTTGGTGTACCTGGTGT CGCGTCGGTTGTGGAATGACCCGCAGAAGAGCCTGATCAGCACCGTGCTGTACATGAGTTTTGTCAGCGTGGCGGCCCTGGGCGGTTATGCCAACCTCGA TCCGCAGTTCACGTTCTGGGTGAACCTGACGGGCGTGGCCTTGTGGTTTTGCTTTGACAGCACGACCCGCAATGGACGACTCGGCGCCTGGGCGCTGTTG
Amino Acid Sequence
>4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
MDAGLRIDVDTYRGTREGVPRLLESLDEASVKATFFFSVGPDNMGRHLWRLIRPQFLWKMLRSNAVGLYGLDILLAGTAWPGKPIGRDLGHLMRQAKAAG HEVGLHAWDHHGWQANTGRWSEAQLVEQIRRGVESLSDILGERIDCSAAAGWRADERVVQAKQGFNFRYNSDCRGTSLFRPTLADGSAGTPQIPVDLPTF DEVVGPVVAAKDFNTFILDRFAESKLNVYTIHAEVEGILMANEFRQLLAQAGQRGIDFKPLGELLPADLTTLPQQQLVRGVLPGREGWLGVQQA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site