Pseudomonas simiae WCS417, PS417_RS14275

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01870
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0005975 carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF88713
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01522
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd10939 CE4_ArnD - - 2 290 0.0
PANTHER PTHR10587 GLYCOSYL TRANSFERASE-RELATED - - 4 267 7.9E-19
Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable 1 294 63.267994
SUPERFAMILY SSF88713 Glycoside hydrolase/deacetylase IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel 13 237 1.27E-26
Pfam PF01522 Polysaccharide deacetylase IPR002509 NodB homology domain 14 169 2.7E-12
Gene3D G3DSA:3.20.20.370 Glycoside hydrolase/deacetylase - - 5 253 9.4E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.